KEGG   Gossypium arboreum (tree cotton): 108467701
Entry
108467701         CDS       T05776                                 
Name
(RefSeq) uncharacterized protein LOC108467701
  KO
K03873  elongin-B
Organism
gab  Gossypium arboreum (tree cotton)
Pathway
gab04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:gab00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    108467701
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:gab04121]
    108467701
   03400 DNA repair and recombination proteins [BR:gab03400]
    108467701
Ubiquitin system [BR:gab04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul2 complex
    Adoptor protein
     108467701
   Cul5 complex
     108467701
DNA repair and recombination proteins [BR:gab03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     108467701
SSDB
Motif
Pfam: ubiquitin Rad60-SLD Dsc3_N UBL_UBAC1 DUF3969 Ubiquitin_2 Rad60-SLD_2
Other DBs
NCBI-GeneID: 108467701
NCBI-ProteinID: XP_017623924
UniProt: A0A0B0NRY4
LinkDB
Position
8:complement(1497646..1502018)
AA seq 103 aa
MAMYIRVKRSKTTYFIQCDPTETTLDIKQKLHTLIDQPVNDQRLILMNTGDILEDSKTLA
DQKVENDAVVALTLRKDDNEFEDVNIVKPNDFYQSRDTDSGNW
NT seq 312 nt   +upstreamnt  +downstreamnt
atggctatgtacatccgtgtgaagcgtagcaagacaacatactttatccagtgtgatcca
actgaaactaccctagacattaagcaaaagttgcataccctcattgatcaacctgttaat
gatcagcgtttgatccttatgaatactggggatatattagaggattcaaaaactttggca
gatcagaaggttgaaaatgatgctgttgttgcactgaccttgagaaaagatgacaacgag
ttcgaggatgtcaacatagtaaaaccgaatgatttctaccaatctcgtgacacagatagt
ggaaattggtga

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