Gossypium arboreum (tree cotton): 108467842
Help
Entry
108467842 CDS
T05776
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT5
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
108467842
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gab04121
]
108467842
Enzymes [BR:
gab01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108467842
Ubiquitin system [BR:
gab04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
108467842
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
PHD_4
DUF7567
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
108467842
NCBI-ProteinID:
XP_017624135
UniProt:
A0A0B0PCP4
LinkDB
All DBs
Position
8:85088362..85091108
Genome browser
AA seq
339 aa
AA seq
DB search
MEFDNIECVSTTDGMNEDEIHHHNLQHPHPHHAHHQFSSSKPHNATNTTNNGNTTTNNIV
GPTAIAPATSVHELLECPVCTNSMYPPIHQCHNGHTICSTCKTRVQHRCPTCRQELGDIR
CLALEKVAESLEMPCKYYNLGCPEIFPYYSKLKHEAMCNYRPYNCPYAGSECSVVGDIPF
LVGHLRDDHKVDMHTGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMA
PVYMAFLRFMGDETEARNYSYSLEVGANGRKLIFEGTPRSIRDSHRKVRDSHDGLIIQRN
MALFFSGGDRKELKLRVTGKVWKEQQNPDTGVCIPNLRS
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atggagttcgataacattgagtgtgtgtcaactacagatggaatgaatgaggatgagatc
catcaccataacctgcaacatcctcaccctcatcatgctcaccatcaattttcatcgtcc
aagcctcacaatgccaccaacaccaccaacaatgggaataccaccaccaacaacattgtg
ggtcctacggctatcgctcctgctaccagcgtccatgaattgttagaatgtcctgtttgt
accaattctatgtacccaccaatccatcagtgccacaatggccatacaatttgttctacc
tgtaaaacaagagtacaacatcggtgccccacttgtagacaggaactcggtgatatcaga
tgtttagcattggagaaagtggcagaatcccttgagatgccttgcaaatactacaacttg
ggatgcccagaaatatttccctattacagcaaactcaaacatgaggcaatgtgcaactac
agaccatacaattgtccctatgctggatcagaatgttctgttgtcggggatattcctttc
ctggttggccatctgcgggatgaccacaaggtggacatgcatactggctgcacatttaac
catcgctatgttaagtccaaccctcgggaagtagagaatgctacctggatgctaacagtc
ttccattgctttggtcagtatttttgtcttcactttgaagctttccagcttggcatggcc
cctgtctacatggcatttctccgtttcatgggtgatgaaacagaggctaggaactatagc
tatagccttgaggttggagcaaatggccgaaaacttatatttgaaggcaccccacgtagc
atccgtgatagtcaccggaaagtcagggacagtcatgatggtctaattatccaacgtaac
atggcacttttcttctctggtggggataggaaggagctgaagctgagggttacagggaag
gtatggaaggaacaacaaaatccagatactggtgtatgcataccaaacttacgcagctga
DBGET
integrated database retrieval system
