Gossypium arboreum (tree cotton): 108467971
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Entry
108467971 CDS
T05776
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1-like
KO
K14485
transport inhibitor response 1
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
108467971
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gab04121
]
108467971
Ubiquitin system [BR:
gab04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
108467971
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GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
F-box-like
LRR_4
DUF7885
F-box
LRR_At1g61320_AtMIF1
Motif
Other DBs
NCBI-GeneID:
108467971
NCBI-ProteinID:
XP_017624298
UniProt:
A0A0B0NQ67
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Position
8:135835103..135840021
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AA seq
587 aa
AA seq
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MPKRLAYSLPDEVLEHVFSFIQSDKDRNVVSAVSKSWYEIERWCRRKIFVGNCYAVSPKM
VVRRFPQVRSIELKGKPHFADFNLVPDGWGGYVLPWITEMAVAYPWLEEIRLKRMVVTDE
SLELIAKSFKDFKVLVLASCEGFSTDGLAAIAVSCKNLRELDLRESEVDDSSVHWLSHFP
ETYTSMVSLNISCLGSDEVSFSALERLVSRCTNLRSLKLNRAVPLDKTANILRLAPQLVE
FGTCTYSAELRSDVFSNLAGAFSNCMELRSLCGFWDVVPDYLPAIYSVCSRLTSLNLSYA
TIQSLDLIKLVSHCPSLQRLLVLDYIEDSGLEALASNCKDLQELRVFPSDPFDAEPNASL
TEQGLVAVSLGCPKLQSVLYFCRRMSNAALVTIAQNRPNLTRFRLCIIEPNTTDYLTGEP
FDVGFGAIVEHCKDLIRLSLSGLLTDCVFEYIGKYAKKLEMLSVAFAGDSDLGLHHVLSG
CESLRKLEIRDCPFGDKALLTNAAKLETMRSLWMSSCSVSFGACQLLSQKMPRLNVEVID
ERGPPDSRPENCTVDKLYIYRSVAGPRFDMPPFVWTKDEDLALRLSP
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgccgaagagattagcgtattcgctcccagatgaggtgctggagcatgtattctcgttc
atacaatcggataaagatcggaacgtggtatcggcagtgagtaaatcgtggtacgagatt
gagcggtggtgtcggaggaagatattcgtcgggaactgttatgctgtgagccctaagatg
gtggtcagacggttcccgcaagttagatccattgagttgaaagggaaaccgcacttcgct
gacttcaatttggtaccggacggctggggcggttacgttttgccgtggattacggagatg
gctgtcgcttacccttggctcgaagagattcggcttaaacggatggtcgtcacggatgaa
agcttggagcttattgctaagtcatttaaggatttcaaagtattggtgcttgcttcttgt
gaagggttttcaactgatggacttgctgccattgctgttagttgcaagaacctgagagag
ctggacttgcgagaaagtgaagtggatgattcgagtgtgcattggctcagccattttcct
gagacatacacatccatggtgtctcttaacatttcctgtttaggatcagatgaagttagt
ttttcagctttggagcgcctggtcagtagatgtacgaacctcaggtcccttaagctcaac
cgcgctgttccccttgataagactgcgaacatattacgacttgcaccgcagctggttgaa
ttcggcacttgcacctattcggctgagctacgttcagatgtcttctcaaacttggctgga
gctttttctaattgcatggaactaaggagtttgtgtgggttttgggatgtggttccggat
taccttccagctatttactctgtctgctctagattaacgtcactgaacttgagttacgca
accatacaaagccttgatctcatcaagcttgtaagccactgtccgagtttgcagcgccta
ttggtacttgattatattgaagacagtggccttgaagcacttgcatctaattgcaaggac
ctgcaggaattacgggtttttccatctgacccgtttgatgcagaaccaaatgcatccttg
acggaacagggccttgttgctgtttctttgggttgtcctaagttacaatcagttttgtac
ttctgccgcagaatgtctaatgcagctctagtcacaattgctcagaaccgtccaaacttg
acccggtttcgtctttgtataattgagccaaatacaactgattacctgaccggagagcca
tttgatgttggttttggagccattgttgagcattgcaaggatctcatacggctttccctg
tccggtctcctcacagattgcgtgtttgaatatattggaaaatatgcaaaaaagctggaa
atgctatccgtggcttttgcaggagatagtgatttgggactccatcacgtgctttcaggg
tgtgaaagcctacggaaactagaaattagggactgccccttcggagacaaggctcttttg
accaatgctgcaaagctggagacaatgcgatccctttggatgtcttcctgctccgtgagt
ttcggagcttgtcagctgctaagtcagaagatgccgaggctgaatgttgaagttatagat
gagaggggacctcctgattcaagacccgaaaactgcacagttgataagctctatatctac
cgatctgtggctgggccaaggtttgacatgcctccttttgtttggacgaaggatgaagat
ttggctttgaggctttctccatag
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