Gossypium arboreum (tree cotton): 108468789
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Entry
108468789 CDS
T05776
Name
(RefSeq) F-box/LRR-repeat protein 3-like isoform X1
KO
K10268
F-box and leucine-rich repeat protein 2/20
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gab04121
]
108468789
Ubiquitin system [BR:
gab04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
108468789
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Gene cluster
GFIT
Motif
Pfam:
F-box
F-box-like
LRR_At1g61320_AtMIF1
LRR_EndoS
LRR_RPS2
Motif
Other DBs
NCBI-GeneID:
108468789
NCBI-ProteinID:
XP_017625138
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Position
7:1403091..1405101
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AA seq
472 aa
AA seq
DB search
MDTMLCDELLQEIFKRLPSTPSAALSVSLVSKRWLNLYRSSKTSLSLRFLPHNSMLVSLS
SLLSYYPSLSSLSLVLSDSITNANSSTATAFTDHLFFIVSSSCSNLNHLRFLVGPVSVSS
LFSLSRSCSQLSCITISLSKPLCISWVVSFPCLKELCLYICPNGVNKFGSLLNEELDAEF
GLETLFLSGIQAGDEGIGWLWRNCKRLKKLQLKNCASVGDGESFSSFILCVKGLQEVDLR
KCRSIVDGVLLKLAENCGSLNSLLVYDGGSKEGLLEFINTCRCNLQKLDLRLPLDLNNTH
LSAVAMNLRHLSTLKLQSCCLVTGEGLNTLGTALYSSLEELALINCDVVEREIGLLATLG
QNLRILRKLDLSYNEFLVDKELTSMLISCNNLTDLKLRGCRKITGVTLFSMSKNIKCLQS
VDIMNCPGIEAEAVEFLVLNCSQMRQMVVEENKVSNIARTWALHKVIEVTSG
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atggataccatgttatgtgatgaattattacaagaaatattcaaaaggctgccatcaaca
ccatcggctgctttatcagtgtctttagtttcaaagcgttggcttaacctttatagaagc
tcaaaaacttcactttctctcaggtttcttcctcacaattcaatgcttgtttctttatct
tctcttctttcttattatccttcactttcttctctttctcttgtattatctgattcaatc
actaacgccaattcaagcactgctactgcttttactgatcacctttttttcatagtttct
tcttcttgttctaatcttaatcatctcaggttcttagttggtccagtttctgtttcttct
ttattttctctatcaagatcttgttcccaactttcttgtatcactatttctttatctaaa
cctctttgtatcagctgggttgtgtcatttccctgtttgaaggagttgtgtttgtatata
tgccccaatggagttaataaatttgggtcgcttttaaatgaggaattggatgcagaattc
ggtttagaaaccctgtttttatctgggattcaagcaggtgatgagggtattggttggcta
tggaggaactgtaaaaggctcaagaaattacagctaaagaactgtgcaagtgttggtgat
ggtgaatcattttcatcatttatcttgtgtgttaaaggtcttcaagaagttgacttgagg
aaatgtaggagtattgttgatggggttttattaaaattggctgaaaattgtggttcattg
aattctctattggtttatgatggaggaagcaaagaaggtttacttgaattcataaacact
tgcaggtgtaatttgcagaaacttgaccttagattaccattagacctcaacaacactcat
ctctcagctgttgcgatgaatttaagacatctctcaacacttaagcttcaaagttgttgt
cttgttacaggtgaaggtctaaatacacttgggactgccttgtatagcagtcttgaagaa
ctagcattgataaactgtgatgttgttgaaagagagataggattgttagccaccttggga
caaaatttaaggatcttgaggaaattagacttgtcttataatgagttcttggttgataaa
gagctcacttcaatgctaatttcatgtaataatctgacagatttgaagttaagaggatgt
aggaagataactggtgtgacattgttttctatgtctaagaacatcaagtgtttacaaagt
gttgatatcatgaattgtcctgggattgaagctgaggctgttgagttccttgttttgaac
tgttcacaaatgagacaaatggtggttgaggagaacaaggtttctaacattgcaagaaca
tgggcattacataaagttatagaggtaacttctggttga
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