Gossypium arboreum (tree cotton): 108468919
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Entry
108468919 CDS
T05776
Name
(RefSeq) uncharacterized protein LOC108468919
KO
K23325
transducin beta-like protein 2
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
gab03012
]
108468919
Translation factors [BR:
gab03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
108468919
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Beta-prop_WDR5
Beta-prop_THOC3
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_WDR3_1st
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
WDR55
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
WD40_Gbeta
EIF3I
Beta-prop_RIG_2nd
Ge1_WD40
Beta-prop_WDR75_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
Beta-prop_WDR41
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_HPS5
Beta-prop_Vps41
Beta-prop_VPS8
WD40_MABP1-WDR62_1st
WD_LRWD1
Beta-prop_IFT122_1st
Beta-prop_DCAF12
Lactonase
Nucleoporin_N
Motif
Other DBs
NCBI-GeneID:
108468919
NCBI-ProteinID:
XP_017625275
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Position
8:complement(137995055..137998892)
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AA seq
437 aa
AA seq
DB search
MDPILAAAALSAVLGAVIAFVFFKSYILKQRSNVQAISEPELHPDPKKTSKPQHVPKKYH
SKPHSHASDKDQSKRHHPLDLNTLKGHADSVTGMCFSSDGRNLATACADGVVRVFKLDDA
SSKSFKFLRINVPLGGHAVAVAFADDSSSIVVASQTLTGCSLYMYGEENPKKGSTDSNQQ
SKLPLPQVKWEHHKIHDKQAILTLTGATASYGTGDGSAIIASCSEGTDILLWHGRTGKVL
GHVDTNQLKNTMATISPNGRFLAAAAFTADVKIWEIVYAKDGSVKEVLNVMQLKGHKSAV
TWLCFSPNSEQIITTSKDGSIRVWNINVRYHLSEDPKTLKVFPIPLHDPSGSALHYDRLS
LSPDGKILAATRGPTLQWLCLETGKVLDTAEKAHDGDITWITWSPKTMPLGNEQVVILAT
ASVDKKVKMWAAPSVTS
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atggatccgattctcgcagccgcggcactttcagccgttctcggggctgtgatcgcgttt
gtttttttcaaaagctacattctgaagcaaagatccaatgtccaggccatttcggagccc
gagcttcatccggatcccaaaaagacgtcaaagcctcagcatgttcctaaaaagtatcat
tcgaagcctcattctcatgcctctgacaaggatcaaagcaagcgtcatcatccattggat
ttgaatactcttaaaggtcatgcggattcagttacagggatgtgtttctcatctgatggt
cgtaatttggcaactgcttgcgctgatggagtggttagggtatttaagttggatgatgct
tcaagtaaaagtttcaagtttttaagaatcaatgtgcctcttggaggtcatgcagtagct
gtggcatttgctgatgattcttcttctatagttgttgcatctcagactctgacggggtgt
tccttgtatatgtatggagaggaaaacccaaaaaaaggtagtactgactccaaccagcag
tcaaagcttcctcttccacaagttaagtgggaacatcataaaatccatgacaaacaagca
atcctgaccttaactggagctactgcaagttatggaactggagatgggagtgccattatt
gcctcttgttcggaaggtactgatatcttactttggcatgggagaaccggaaaagtttta
gggcatgttgacactaatcagttaaaaaataccatggctacaatatcaccaaatggccgt
ttccttgctgctgcagcattcacagctgatgtaaagatatgggagattgtatatgccaag
gacggttcagtcaaggaggttttgaatgttatgcagcttaaagggcacaagagtgcagtg
acttggttatgcttttctccaaactcagagcaaattattacaacatccaaggatggttca
ataagagtttggaacatcaatgttcgataccatctttctgaggatccaaaaactctgaag
gtgtttccaataccacttcatgatccaagtggttctgctctgcactatgatcgtctcagc
ttatcccctgatggaaagatactggcagcaacccgtggtccaacattgcagtggctatgt
ttggaaacaggaaaggtgttggatactgctgagaaagcccatgatggtgatatcacatgg
attacatggtctccaaagactatgccactaggaaatgaacaagtggtgattctggccacg
gcaagtgtcgacaagaaagtgaagatgtgggcagcaccgtcagtaacttcgtag
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