Gossypium arboreum (tree cotton): 108468993
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Entry
108468993 CDS
T05776
Name
(RefSeq) E3 ubiquitin-protein ligase ATL4-like
KO
K10663
E3 ubiquitin-protein ligase ATL4 [EC:
2.3.2.27
]
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gab04121
]
108468993
Enzymes [BR:
gab01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108468993
Ubiquitin system [BR:
gab04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
108468993
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
TMEM51
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
108468993
NCBI-ProteinID:
XP_017625354
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All DBs
Position
8:132815283..132816869
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AA seq
341 aa
AA seq
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MASPPPLLYGVIGGTVASSENNSSESSHSSSSSIESAKPSIIIIILILSITLLVSVSLCL
LLRHVNRRCLRHLSRSSTSTIIASAASHRVSPEQSPTALLLDSLPLFTFSSITRRRSNGD
STVFGDCAVCLSKFEQQDQLRLLPLCCHAFHAQCIDTWLTSNQTCPLCRSPLFASEPDLM
KSLLQSSNAATPIGSGGSDSFRLEIGSVSLRQPGSESGEQRRSYSIGSFDYIVEEESEVT
RNQTHQRNVSDKEEVVGGAEAASEGSLAGEVATGRSWLKEYVDRLSSSLSSRAMSFRSSG
RLFTGSSRRSDIAGVITADYDVEANRIGEEISEMFRWFSGV
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgccgccacctttgttatacggagttattggaggaactgtggcctcttcggaa
aataatagcagtgaaagctcccattcttcttcttcttcaattgagagtgcaaagcctagt
attataataatcattttgatcctttctataaccttgcttgtttctgtttctctttgtctc
ctcttgcgtcatgtcaaccgccgttgcttgcgtcacctctctcgttcctctacctccact
attatcgcctccgctgccagccaccgtgtcagtcccgaacaatcgccgacggctttgttg
cttgattctcttcctctttttactttctcttccattactcgccgccgctccaacggtgat
tcaacggttttcggagattgtgccgtttgtttgtcgaaatttgaacagcaggatcagctc
aggcttctccctctctgttgtcacgcatttcacgcccagtgcattgatacttggcttact
tcaaatcagacttgtcctctatgccgctctcctctcttcgcttccgagcccgatctcatg
aagtcattgcttcagtcttctaacgcagccacaccgatcggaagtggcggaagcgatagt
ttccggctcgagatcggttctgtaagtctccggcaaccaggctccgaatcaggtgagcaa
agaaggtcgtattccattggctcttttgattatatcgtcgaggaagaatcagaggtgact
aggaatcaaactcatcagagaaacgtctccgataaagaagaggtggtcggaggagctgag
gcagcttcggaagggagcctagccggcgaggttgccaccggaaggagttggcttaaggaa
tacgtggataggctctcttcttcgctatcgtctcgtgcgatgtcatttcgtagctcaggt
agactcttcaccgggagcagtcgacgaagcgatatcgccggcgttatcaccgcagattac
gacgtggaggccaatcgcatcggcgaggagatcagcgaaatgtttcgttggttctcaggg
gtatga
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