KEGG   Gossypium arboreum (tree cotton): 108469342
Entry
108469342         CDS       T05776                                 
Name
(RefSeq) autophagy-related protein 3-like
  KO
K08343  ubiquitin-like-conjugating enzyme ATG3
Organism
gab  Gossypium arboreum (tree cotton)
Pathway
gab04136  Autophagy - other
Brite
KEGG Orthology (KO) [BR:gab00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04136 Autophagy - other
    108469342
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:gab04131]
    108469342
   04121 Ubiquitin system [BR:gab04121]
    108469342
   03029 Mitochondrial biogenesis [BR:gab03029]
    108469342
Membrane trafficking [BR:gab04131]
 Autophagy
  Autophagosome formation proteins
   Atg8 conjugation proteins
    108469342
Ubiquitin system [BR:gab04121]
 Ubiquitin-conjugating enzymes (E2)
  UBL-conjugating enzymes
   108469342
Mitochondrial biogenesis [BR:gab03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    108469342
SSDB
Motif
Pfam: Autophagy_act_C
Other DBs
NCBI-GeneID: 108469342
NCBI-ProteinID: XP_017625723
LinkDB
Position
7:67364789..67368117
AA seq 314 aa
MVLSQKIHEAFKGTVERITGPRTVSAFKEKGVLSVSEFILAGDNLVSKCPTWSWESGEPS
KRKSYLPPEKQYLITRNVPCLRRAASVEQEYEAAGGEFLLDNEDNDGWLATHGRPKDRND
VEEILPSMETLEIRQNETVRSIPSYFGSGENEEDIPDMADYEEADNAIDTDAATLPSDYL
VAQEPDDDNILRTRTYDVSITYDKYYQTPRVWLTGYDELRMLLQPELVLEDVSQDHAHKT
VTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMSHGVDPEVDKYLFLFLKFVASVIPTIE
YDYTMDFDLGSSSS
NT seq 945 nt   +upstreamnt  +downstreamnt
atggtgctttctcagaagattcacgaggctttcaaaggaactgtggagagaataacaggg
ccccgcaccgtctctgcttttaaagagaaaggggttttgagcgtctccgagttcatcctc
gcgggcgacaatctcgtctccaaatgccctacctggtcttgggaatcaggagagccaagc
aagaggaagtcctatttaccgcccgaaaagcaatacttgattactaggaatgttccttgc
ctgaggagggctgcatcggtggaacaagagtatgaagctgctggaggagagtttcttctt
gataatgaagacaatgatggttggttggcgactcatgggagacctaaagatagaaatgat
gtggaggaaatcttgccttcaatggagactttagaaataaggcagaatgagactgtaagg
tcgataccttcatattttggaagcggtgaaaatgaagaagatatacccgacatggctgac
tatgaagaagcggacaatgctattgatactgatgcggcaactctaccatcggattacctt
gttgctcaagagcctgatgatgacaatattttacggacccgaacctatgatgtcagcata
acgtatgataaatactatcaaactccaagggtctggcttactgggtatgatgagttgagg
atgcttttgcaaccagagcttgtgctggaggatgttagtcaggaccatgcacacaaaact
gttactattgaggaccatcctcacttacctgggaaacacgcgtctgtacacccatgcaga
catggtgctgtgatgaaaaagatcattgatgtgctgatgtctcatggtgttgatccagaa
gttgataagtatcttttcttgttcttgaaatttgtggcctctgtaattccaacaattgag
tatgactacaccatggactttgatcttggtagctccagcagttaa

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