Gossypium arboreum (tree cotton): 108469517
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Entry
108469517 CDS
T05776
Name
(RefSeq) uncharacterized protein LOC108469517
KO
K10891
fanconi anemia group D2 protein
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
108469517
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gab03400
]
108469517
DNA repair and recombination proteins [BR:
gab03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FANCD2-I complex
108469517
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FancD2
Sec3_C_2
Spo7_2_N
Motif
Other DBs
NCBI-GeneID:
108469517
NCBI-ProteinID:
XP_017625881
LinkDB
All DBs
Position
7:complement(12741008..12754908)
Genome browser
AA seq
1482 aa
AA seq
DB search
MVLLRQQQQPRKRSSSSFVPSCPPPKIPKPQNDIGTAVDAVEKMVSILAEGGCTLVNPLG
PPSLPSDPYKLRRQLSRLFSSTDDRSVFLSGFSSYIQSSSNLRRVLMSSNGSNFGPARSE
SLVRHLLLVAPIQLDLQIMLLEKLPEYFDVVPGDSQTSLSLEDDVSRLIINQFRWLDFVV
DPSSFTDKLLQVLSICPLHLKKEIIGSLPEIIGDQNNKTVIDSLEQMLHEDPSVIVPVLD
SFSNLNLDDQLQEQVITIALSCIRTIDAEHMPCLLRFLLLSATQLNVRRIISQIREHLKF
VRTPHNRTMQKNKLKGKLVVDNTEASVLDALRSSLQFKSLLCQEILKELNGLEKPRDHKV
IDMWLLILLYTNGESMRKSVEKVFKKKIVEGCIQEVMLDQCIRGNKELAQEYFLSFLSLS
EYILACKEQKARDFGIYMYTLLFEEFADTYSRQEVLGALVTHVGSAVSFEVTSALQIMAS
LASKHARELIPLSYHINGILDYLEGLTVENLYKVYEVFSHMALLARSSADCLGSSIANEL
FIIVRKQVGHPDLKYKKMGLIGILKIVSCLGVESNVTSSSPFQKSNAEEAVELLETGLES
CKQSCLSLIFFYDELTAILESTTLHPIIMDWIGKHLGEFESIFLSDLDGGQLPSRIPYCG
LEGELWMNLDGEMSPICLNILPLASSSQNASLQFLPANFHLLSTVEQLTNQGSLGGIDAL
LGCPMLLPSSKYFLEAEWQSLTGKQKQIICLSLYYAMNWIRELLNAFCTQVDGRFECISQ
TSKDDIMQKLLKRMRNLVFLESLLSHSIRMCPVTLPQLHLRVEHCGSTFINQPNHVGNKE
KKNEPKMRPESTSPNKRKHKKTSKTSAIGTDGNLHQQTLFDVLRKAGAVTSQEVPDKVSS
KDMATSTSVDHNSHVFNESVLIEVSPVSQALESQKFRFRPLLLECFSILTFSKDHDTCCS
DPVAELPLYLYLIHDLQHKLDYFAAPTKQCSSRNSIAAAVTRMTLDEFLSKIRPLFQSLK
SNLDSSFCILKEGEGNKTCQEHWKFQSTAAGNPDLTNVVPSNSSISTMVFKEILNCFSKM
LNLSEVQRYRSVLSDLLEAFQPDKALDSGSLDVHPCPSPGTIEYLYLGACSFVECILDAV
CSFSFILASEALFTLESAVTSFQKVMDKLDGDDKIIQSAFHQILTLLRGRLASSAKKLLK
HKWDNKNLENGWKNKGEMVQKILRTYLEYDESISDLLDELACTILPQVSLTTMAEDEDYG
FPTLCSATFLSWYRVLFEVNLTVLGKLVKEVVRLEKVRPGFQPVNVHTLLIRLQKNVNVV
VALVSMCRTHDKVTLHAMAVKYGGKFVDSFLKAFDFLQVHFQMHNEAILLLVKELQKATR
TIQTLCSEAKGLKQTVITSKIPATKRSLERFLFRVKALLHSTSNGCTFWMGNLKHKDLRG
QVVSSQAYVDDGIDSIDEDPEGAVDVDPQGSVPSASENSENE
NT seq
4449 nt
NT seq
+upstream
nt +downstream
nt
atggtattgctccggcagcaacaacagccacggaagagatcttcctcttcctttgtccct
tcttgtcctccgcctaaaatccccaaacctcaaaacgacatcggcactgccgttgatgct
gttgagaagatggtttcgatcttagctgagggcggttgtaccttggtaaacccgttgggc
ccgccctcccttccttcagatccctacaagctccgccgccagctctcccgcctcttttct
tctactgacgatcgctccgtttttctatctggtttctcttcttacattcagtcttcctcc
aatcttcgcagggttctcatgtcttcaaacggaagtaattttggtcccgctagaagtgaa
agcttagtccggcatctcttgctggttgcaccgatccaattagacctccaaattatgctc
cttgagaaacttcctgaatattttgatgtagttcctggagattcccaaacatcattgtcc
cttgaagatgatgtttctaggcttatcattaatcagtttcgatggcttgattttgttgtt
gatcctagttccttcaccgataagttattgcaagttctttccatttgtcctttacacttg
aagaaagagataattggatcattgcctgagatcattggtgatcaaaataacaagactgta
attgattcccttgagcaaatgcttcatgaggacccatctgtaattgttcctgtgctcgat
tctttttcaaatcttaatttggatgatcagttgcaagaacaggtcataaccatagcacta
tcatgcattagaacaattgatgcggagcacatgccctgtctgcttcgatttttactgctc
tctgccacacaactaaatgttcgaagaataatctcacagatacgtgagcatttaaagttt
gttaggacaccgcataatcgcacaatgcaaaaaaataaactcaaagggaagttggttgtt
gacaacacagaggcatctgttctagatgctttgagatctagccttcaatttaagagtcta
ctctgtcaagagattttgaaggaattgaatggccttgaaaaacctcgagatcacaaagta
atcgacatgtggctgcttatactattgtacacaaatggtgagtccatgcgaaaaagcgtt
gaaaaggtgtttaagaagaaaattgttgaaggttgcattcaagaagttatgcttgatcaa
tgcattcgtgggaacaaggaactcgcacaggaatatttcctttccttcctttctttatct
gagtatatattggcttgcaaagaacaaaaggcaagggattttggcatttacatgtatact
cttctttttgaagagtttgctgatacttattcaagacaggaagttcttggtgcactagtt
actcatgtgggctctgctgttagttttgaagttacttctgctcttcagattatggcttca
cttgcctcaaaacatgcaagggaactgattccactttcttatcatataaatggaatcttg
gactacttggagggattgactgtagaaaatctttataaggtttatgaggtcttcagccat
atggcactgctagctcgctctagtgctgactgtttgggctcttccattgcaaatgaactt
tttattattgttcggaagcaggttggccatccggatctgaagtacaaaaagatgggtcta
attggaatcttaaaaatagtttcatgtctaggggttgaaagtaatgtcacttcatcatca
ccatttcagaaatcaaatgctgaggaggctgtggagctccttgaaactggcttagaatct
tgcaaacaatcatgcttgtcattgatcttcttttacgatgaactgactgcaattttagaa
agtacaactcttcaccctattatcatggattggattggcaagcatttaggagaatttgaa
tctatatttctgtctgatcttgatggtgggcagttgcctagcaggatcccgtattgcggt
ttagaaggggagctatggatgaacttggacggtgaaatgtctcctatttgtctgaacatt
ctgccattggcttcttcttctcaaaatgcttctttgcaatttcttcctgctaacttccat
ttactatcaaccgttgaacagttgacgaaccaaggatctcttggtggaattgatgcatta
cttggctgtcctatgctacttccctcgtctaagtacttcttagaagctgaatggcagtct
ctgacaggaaagcagaaacagattatttgtctctctctttattatgcaatgaactggata
agggaactgctcaatgccttctgcacacaagtagatgggagatttgaatgcataagtcag
acctcaaaggatgacataatgcagaagctattaaagcgaatgaggaacctagtatttctc
gaaagcttgttaagtcattccatcagaatgtgtcctgtaacactacctcagctccatctt
cgagtggagcattgtggatcaacattcataaaccaaccaaaccatgtggggaataaagaa
aagaagaatgagcctaagatgagacctgaatccacatctccaaacaagaggaagcataaa
aagacttcaaagacctcagcaattggtacagatggaaacctacaccagcaaacattgttt
gatgtgttgaggaaagcaggagcagtgacaagccaagaggtaccagataaggtttcttca
aaagatatggcaacctcaacatcagtggatcacaattctcatgtctttaatgagtcagtg
cttatagaagtttctccagtttcccaagctctggaatcacagaaatttaggttcaggcct
cttctattggaatgcttttccattttgactttttcaaaggaccatgacacctgttgctct
gaccctgtggctgagttgcccctatacctgtaccttattcatgatcttcaacacaaactg
gattactttgctgctccgaccaaacaatgttcctcaaggaacagtattgctgctgctgtt
accaggatgacattggatgaatttcttagcaaaattagaccactctttcaaagtcttaag
agtaacttagacagttcgttctgtattcttaaagaaggagaaggtaacaaaacttgtcaa
gaacactggaagtttcaatccactgctgctggcaacccagatttaaccaatgttgtgcca
tcaaattcttcaatttctactatggtgtttaaggaaatacttaattgtttcagtaagatg
ctaaacctttctgaagttcaaaggtacagatcagttctttcagatctccttgaggccttt
cagcctgataaagcattagattctggttccttagatgtgcacccttgtccttcacctggt
acaatagaatatttgtatcttggtgcttgttcatttgtagagtgtatccttgatgcagta
tgttctttctcctttattctggcatcagaggctctttttactttggaatcagctgttaca
tcatttcagaaggtcatggataagttggacggagatgataaaatcatacagtcagcgttt
caccagatccttactttattgcgtggcagacttgcatcttctgctaagaaacttttgaag
cataaatgggacaataaaaatcttgagaatggctggaagaacaaaggagaaatggtacaa
aagatactgcggacttacttagaatatgatgagtcaatttctgatttgcttgatgagctt
gcctgcacaattttgccacaggtctctcttacaacaatggcagaagatgaggattatggt
ttcccaactctatgttctgcaactttcctctcatggtaccgtgtgctgtttgaagtgaat
ctcacagttcttggaaaattggttaaggaagttgttcgcttagagaaggttcgacctggt
tttcaacctgtaaatgttcacacacttttgatcaggttgcaaaagaatgttaatgtggtt
gttgcactagttagcatgtgcagaacccatgacaaggtcaccctgcatgccatggcagtc
aagtacggtgggaaattcgttgattccttccttaaagcttttgacttcttgcaggttcac
ttccaaatgcataatgaagccatacttctgttggtgaaagaacttcaaaaggctacacga
actattcagaccctatgttctgaagccaagggcttgaaacaaacagtcatcactagcaaa
atacctgctactaaaagatctttggaacgctttttgtttcgtgtcaaggctcttctccat
tctacctctaacggatgcactttctggatgggtaatctaaaacacaaggatctgagggga
caggtggtgagctcccaggcatatgtagatgatggaattgacagcattgatgaagatcca
gagggagctgttgatgtggatccacaaggtagtgttccttctgctagtgaaaacagtgaa
aatgaatga
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integrated database retrieval system
