Gossypium arboreum (tree cotton): 108469529
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Entry
108469529 CDS
T05776
Name
(RefSeq) probable pectate lyase 4
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab00040
Pentose and glucuronate interconversions
gab01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
108469529
Enzymes [BR:
gab01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
108469529
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
108469529
NCBI-ProteinID:
XP_017625890
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Position
8:complement(6303728..6305118)
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AA seq
378 aa
AA seq
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MAIILSRCLAWALFMVFLMASFSSSLANMNEIDKCWRGNPLWRSQRQQLAKCSVGFAGKM
INNIGKDVVKYKVTDASDDPLSPKPGTLRYGTTMIKGKVWITFKNSMTIILQRPLLLSSF
TAIDGRGIDVHITGVGCLLVYQATDIIIHGLRIHHCKAQPPSTVMGPNAKVIPLGKMDGD
AIRLVTARKVWIDHNTLYECQDGLLDVTRGSTDITISNNWFRNQDKVMLLGHDDGHLRDK
NMKVTVIFNHFGPNCNQRMPRVRHGYAHVANNFYQGWEQYAIGGSMSPSIKSEANFFVAP
NDAGNKEVTWRKGEKGLWKFYSVGDVFKNGASFSKQTGVGGAKPNYNREQDFKVVDAGSV
KELTSESGVLRCSRSLMC
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atggctataatattatcaaggtgcttagcatgggctcttttcatggtctttctaatggca
agttttagttcaagtttggctaatatgaatgaaatcgataaatgttggagaggtaaccct
ctttggcggagtcaaagacaacaattggccaaatgctctgttggttttgctggcaaaatg
atcaacaacatcggcaaagatgtcgtgaaatacaaggtcaccgatgcttctgatgaccct
ttaagtcctaaaccagggacccttcgttacggaaccacaatgatcaaaggcaaagtatgg
atcacattcaaaaatagcatgaccatcatactccaaagaccacttctcttaagcagcttc
accgccatcgacggtcgtggtatcgatgtccacataaccggcgtcgggtgcctgctagtg
taccaagcgaccgatattatcatccacgggcttcgcatacaccattgcaaagcccaacca
cctagcaccgtgatgggtccaaatgcgaaggtgatccctttaggaaaaatggatggagac
gctataagattggtcactgcaaggaaagtgtggatcgatcataacacattgtatgagtgt
caagacggtctcctcgatgttactcgtggttctacagacatcaccatatcgaacaactgg
ttcaggaaccaagacaaagtcatgctccttgggcacgacgatggtcatttgagagacaaa
aacatgaaggtcactgtcattttcaatcatttcggacctaactgcaaccaaagaatgcca
agagttcgccatggatatgcgcatgtagctaacaatttttaccaagggtgggagcaatat
gccataggtggaagcatgagccccagcatcaagagcgaagctaattttttcgtcgctccg
aatgatgctgggaacaaagaggtaacatggagaaaaggggaaaaagggttatggaaattt
tattcggtaggggatgttttcaaaaatggagcatctttcagtaagcaaacaggtgtaggt
ggggcaaagcctaactataaccgagaacaggattttaaagttgtcgatgctgggtctgtt
aaagaattgacaagtgaatctggtgttttaagatgctctaggagtttaatgtgctaa
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