KEGG   Gossypium arboreum (tree cotton): 108469537
Entry
108469537         CDS       T05776                                 
Name
(RefSeq) UBP1-associated protein 2A-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
gab  Gossypium arboreum (tree cotton)
Pathway
gab03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:gab00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    108469537
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gab03019]
    108469537
   03041 Spliceosome [BR:gab03041]
    108469537
Messenger RNA biogenesis [BR:gab03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     108469537
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     108469537
Spliceosome [BR:gab03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    108469537
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_Nup35 Cut8
Other DBs
NCBI-GeneID: 108469537
NCBI-ProteinID: XP_017625897
LinkDB
Position
8:6927863..6932127
AA seq 484 aa
MAKKRKQRSSEPQPTKTTPDPQSIQQQPEYVPDEDPNPKVEEELQLQEVEEEVEVEEEVE
VEEEVEEEDDDDDDEEAQNQTLVGSSNANGAPEETGQEEDLDDEPFEKLLEPFGKDQLIT
LIRRAVDKHPEFISSVREFADADPAHRKIFVHGLSWDTTAETLTAEFCKYGEIEECKAVT
DRVSGKSKGYAFILFKHRSGARRALKQPQKKIGNRTTSCQLASQGPVPAPPPTAAPVSEY
TQRKIFVSNVSADLDPEKLLEFFKQYGEVEEGPMGLDKQTGKPKGFALFVYRSVESARKA
LEEPHKNFEGHVLHCQKAIDGPKSTKGGYGGGTSGGHHQQYQQHQHQHQQGHQIQSHYHH
AKKGKYSSGGSETGHLMAPSGPTAVGFNPGVAAGGFNPAAAAPTLNPALGQALTALLAGQ
GGLGLGNLLGGLSGAPVNQGTPAAGYGNQVAGGYGVQGGYQNPQMGQGGAGRNQPGSGAP
YMGH
NT seq 1455 nt   +upstreamnt  +downstreamnt
atggccaaaaagcgaaagcaacgatcctccgaaccccaacccaccaaaacaacgccggat
cctcaatcaatccaacaacaacccgaatatgtacccgacgaagatccgaaccccaaagta
gaagaggaactgcaactacaggaagtggaagaggaagtagaagtggaagaagaagttgaa
gtagaagaggaagttgaagaagaagacgacgatgacgatgatgaagaagctcaaaatcaa
accctagtcggttcctctaacgccaacggtgccccggaagaaacgggtcaagaagaggat
ttggacgacgagccgttcgagaaacttctggaaccattcgggaaagatcaattgattacc
cttatcaggagagccgttgataagcacccggaatttatctcgtcagttcgggagttcgca
gatgcggacccggcccatcggaagatcttcgttcatgggctaagttgggataccactgcg
gaaaccctcaccgccgaattttgtaagtatggggaaatcgaagaatgcaaagctgttacc
gatagggtttctgggaaatctaaaggttacgcctttattctatttaagcatcgtagtggg
gcacgccgggctttgaaacaaccccagaagaagattggaaatcgaactacttcttgccag
ttggcttcacaggggccggttccggcgccgcctcctacggctgctcctgtttccgagtat
actcaaaggaagatttttgttagcaatgtgtcagctgacttggacccagagaagttgctt
gagttttttaaacagtatggggaagttgaggaaggtccaatggggctcgataagcagaca
gggaaaccaaaggggtttgccctttttgtatacaggtcagttgagagtgcgaggaaagcg
ttagaagagcctcataaaaattttgaaggtcatgttttgcattgccaaaaagccattgat
gggccgaaatcgactaaagggggttatggaggaggtacttccggtgggcaccatcagcag
taccaacagcatcagcatcagcatcagcaaggacatcagattcagtctcattaccatcat
gctaagaagggaaagtactcatctggtggatcagagactggtcatttgatggctccatct
ggacctactgcagtggggttcaaccctggagttgctgctggtgggtttaaccctgctgct
gctgcacctactttaaacccagcgcttggacaggctttgactgcattgcttgccggccag
ggtggtttggggcttggtaatctgcttggagggcttagtggcgcccctgtgaaccagggg
acacctgctgcagggtatgggaatcaggttgctggaggctatggagtgcagggtggatat
cagaacccacagatgggtcagggcggtgctggtaggaatcaacctggtagtggtgctcct
tacatggggcattag

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