Gossypium arboreum (tree cotton): 108469564
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Entry
108469564 CDS
T05776
Name
(RefSeq) pseudouridine-5'-phosphate glycosidase
KO
K16329
pseudouridylate synthase [EC:
4.2.1.70
]
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab00240
Pyrimidine metabolism
gab01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
108469564
Enzymes [BR:
gab01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.70 pseudouridylate synthase
108469564
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Gene cluster
GFIT
Motif
Pfam:
Indigoidine_A
Motif
Other DBs
NCBI-GeneID:
108469564
NCBI-ProteinID:
XP_017625946
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Position
7:complement(80617864..80622185)
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AA seq
332 aa
AA seq
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MASSSPSSSSAVKRLSNLSNHLCPTNSNPLVKVSAQVSQALSTGLPVVALESTIISHGMP
YPQNLETAKEVEAIVRDNGAVPATIAILDGVPCIGLNLEQLERLARMGKSAQKTARRDIA
YVVATKRNGATTVSATMFFAAMVGIPLFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAV
VSAGVKSILDIPRTLEYLETQGVCVAAYKTNEFPAFFTETSGCKVPCRLDSPEECARLID
ANRKLNLGNGVLIAVPIAKEYSASGSLIESAIQQALTEAREKNITGNAETPFLLARVNEI
TGGASLASNIALVKNNAAIGAKISVALAQLLK
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcttcttctccatcatcatcatcggctgttaaaagactatcaaatctcagcaac
catctttgcccaactaactcaaaccctttagtcaaagtatctgctcaagtgtcccaggct
ctgtccactggtctcccggttgttgctctcgagtccaccatcatttcccatggaatgccg
tatccgcagaatcttgaaacagccaaggaggtggaggcgattgtgagggacaatggagct
gttcctgctaccatcgccattcttgatggcgtaccatgcataggtttgaatttggaacaa
ctggaaaggcttgcccgaatgggaaaaagtgctcaaaagacagctcgaagggacattgca
tatgttgtggccaccaagaggaatggtgcaacaactgtttctgcaactatgtttttcgct
gccatggttggtatacctctttttgttactgggggaattgggggagtgcataggcatggc
gagcatacaatggatatatcctctgacctcacggagcttggaaggacacctgtagcagtc
gtttctgctggtgtaaaatctatattagatattccaaggacactggaatatttggaaact
cagggagtttgtgttgctgcttacaagaccaatgagtttccagctttttttactgaaaca
agtggctgcaaggtgccttgtcggttagatagcccagaagaatgtgcacggttaattgat
gcaaacaggaagcttaatctcggaaatggagtactgattgcagttcccatcgcaaaagaa
tactcagcttctggaagcttaatagagtctgcaatacagcaagctcttacagaagccagg
gaaaagaacataacagggaatgctgagactccattcttgctcgctagggttaatgaaata
actggaggagcatcacttgcttcaaacattgcgcttgtgaaaaataatgctgctatcggt
gctaagatatctgtagccctggcccagctccttaaataa
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