Gossypium arboreum (tree cotton): 108469589
Help
Entry
108469589 CDS
T05776
Name
(RefSeq) 18S rRNA (guanine-N(7))-methyltransferase RID2 isoform X2
KO
K19306
18S rRNA (guanine1575-N7)-methyltransferase [EC:
2.1.1.309
]
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gab03009
]
108469589
Enzymes [BR:
gab01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.309 18S rRNA (guanine1575-N7)-methyltransferase
108469589
Ribosome biogenesis [BR:
gab03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
108469589
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WBS_methylT
Methyltransf_11
Methyltransf_25
Methyltransf_23
Methyltransf_12
Methyltransf_31
N6_N4_Mtase
Motif
Other DBs
NCBI-GeneID:
108469589
NCBI-ProteinID:
XP_017625992
UniProt:
A0A0B0P9Z2
LinkDB
All DBs
Position
8:139862643..139952801
Genome browser
AA seq
291 aa
AA seq
DB search
MSSRPELQAPPEIFYDDVEARKYTSSSRIAEIQTKLSERALELLALPDDGVPRLLLDIGC
GSGLSGETITENGHQWIGFDISESMLNVALQNEVEGDLLLGDMGQGLGLRPGVIDGAISI
SAVQWLCNADKSSHEPRLRLKAFFGSLYRCLARGARAVLQVYPENLAQRELILSYAMRSG
FAGGVVVDYPHSTKKRKEYLVLTCGPPSLSSVVPSGKGEDGESCSDDESSGDEENQTVCI
SDRHRPQKKQKVNKKGKGREWVLRKKDQMRRKGNVVPPDTKYTARKRKARF
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagtcggcctgaattgcaagccccgccggagattttctacgacgacgtagaagct
cgaaaatacacttcctcatctcgtattgctgaaatacagacaaagctctctgagagagca
ctggaacttctggctttgcccgatgatggagtcccaaggttgctccttgatatcggttgt
ggatcagggcttagtggggagacaataactgagaatggtcaccaatggattggtttcgat
atttctgaatcaatgcttaatgttgctttgcaaaatgaggttgaaggagatttgttactt
ggtgatatgggtcagggcttaggacttcgacctggagttatcgatggagctattagtatc
tctgctgttcagtggttatgcaatgctgacaagtcctctcacgagccaagattgagatta
aaggcttttttcggatcattatatagatgcttagcaaggggagctagagcagtgctccaa
gtatatcctgaaaatctagcccaacgtgagctaattttgagttatgcaatgcgctctgga
tttgctggtggcgtggttgtcgattacccgcacagtaccaagaagagaaaagaatacctt
gtcctcacttgtggcccgccgtccctcagctctgtcgttcccagtggaaaaggtgaagac
ggagagagttgttctgacgatgagagcagtggagatgaagaaaatcagacggtttgcatt
tcggacaggcatagacctcagaaaaagcagaaagtaaacaagaaagggaagggcagagaa
tgggtgttgaggaagaaggaccagatgagaaggaaagggaatgtcgttccccctgacaca
aagtacactgctcgaaaacggaaagctcgtttctaa
DBGET
integrated database retrieval system
