KEGG   Gossypium arboreum (tree cotton): 108469712
Entry
108469712         CDS       T05776                                 
Name
(RefSeq) protein transport protein SEC31 homolog B-like
  KO
K14005  protein transport protein SEC31
Organism
gab  Gossypium arboreum (tree cotton)
Pathway
gab04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:gab00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    108469712
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:gab04131]
    108469712
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:gab02044]
    108469712
Membrane trafficking [BR:gab04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    108469712
Secretion system [BR:gab02044]
 Sec (secretion) system
  Eukaryotic Sec-SRP protein
   108469712
SSDB
Motif
Pfam: WD40_CDC20-Fz Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 WD40_Prp19 WD40_WDHD1_1st WD40 Beta-prop_RIG_2nd Beta-prop_EML_2 TPR_Sec16 WDR55 TPR_GEMI5 Beta-prop_EIPR1 MIOS_WD40 SRA1 EIF3I Beta-prop_WDR35_TULP_N Beta-prop_SCAP Prp18 SatD
Other DBs
NCBI-GeneID: 108469712
NCBI-ProteinID: XP_017626204
LinkDB
Position
8:21556962..21566385
AA seq 1106 aa
MACIKGVNRSASVALAPDAPYMAAGTMAGAVDLSFSSSANLEIFKFDFQSDDLELPVIGE
CPSSERFNRLAWGKNGSGSDEFSLGLIAGGLVDGSIDLWNPLKLIRSEANDQALVGHLSR
HKGPVRGLEFNAIAPNLLASGADDGEICIWDLAAPAQPSHFPPLKGSGSASQGEISYLSW
NSKVQHILASTSYNGTTVVWDLKKQKPVISFADSIRRRCSVLQWHPDVATQLVVASDEDG
SPTLRLWDMRNIMSPVKEFAGHTRGVIAMAWCPSDSSYLLTCAKDNRTICWDTVTGEAVC
ELPAGTNWNFDVHWYPKIPGIISASSFDGKIGIYNIEGCSRYGVGDSDFGTVSLRAPKWY
KRPVGASFGFGGKVVSFRTRSSGSGTSASSEVFLHNLVAEETLVSRSSEFESVIQSGERS
SLRVLCEKKEQESESQDDRETWGFLKVMFEDDGTARTKLLMHLGFSLPEEKDTVQDNISQ
IVNDITLEDKVAEKVGNDGEKEAARFAVDNGEDFFNNLPSPKADTPVSTSENNFAVSDLT
PQEPEGVEESSDPSFDDAVQRALVVGDYKGAVAQCIAANKMADALVIAHVGDPSLWASTC
DQYLKMSRSPYLKVVSAMVNNDLTSLVNTRPLKFWKETLALLCTFAQREEWTVLCDTLAS
KLMAHGNTLAATLCYICAGNIDKTVEIWSRCLTTELDGKSYVDLLQDLMEKTIVLALATG
QKRFSASLCKLVEKYAEILASQGLLTTAMEYLKLLGSDDLSPELVILKDRIALSTEPVKE
GKSAVFENSHPTGIPGFEPSQHIYPDPAAPQIQPSGPGSAYDENYQRSFSQYGAYAPPPS
YLPQAPPANMFVPTQAPHISQTNFAPPPETTQPTVRPFVPSNPPVLRNADQYQQPPSLGS
QLYPGAADPTYPAPPGAGSFAPVPSQMGAAPGPRMPQVVAPAPAPRGFMPVTSTSVQRPG
MGPMQPPSTTQSASVQPAAAPAAPPPTVQTADTSNVPAHQKPVITTLTRLFNETSQALGG
ARANPVKKREMEDNSKKIGALFAKLNSGDISKNASDKLIQLCQALDNNDFGTALQIQVLL
TTSEWDECNFWLATLKRMIKTRQNVR
NT seq 3321 nt   +upstreamnt  +downstreamnt
atggcgtgtataaaaggggtgaacagatcggcgtcagtggcactggcgccggacgcgccc
tacatggctgctgggacgatggccggagcggtggatctatccttcagttcatcggcgaat
ctcgagatcttcaagtttgatttccagagtgacgatctcgagctccccgttataggcgag
tgcccaagctcagagcggtttaaccgcctagcttggggcaagaacggatccggttccgat
gagttttctctcggactcattgctggtggcctcgttgatggtagcatcgatctttggaat
cctttaaaattgatccgctctgaggcaaatgatcaagctcttgttggacatctttcaagg
cacaaagggcctgttcgcggtctcgagttcaatgcaattgctccaaacttgttagcatct
ggggcagatgatggtgaaatttgcatctgggatctggcagcacctgcacaaccctctcat
tttccacctcttaagggtagcggttctgcttctcaaggtgaaatctcatatctgtcttgg
aatagcaaggttcaacacatattggcatcaacttcatacaatggaacaactgttgtttgg
gacttgaagaagcaaaaaccagtgataagttttgcagattcaataagaaggcgatgttct
gttttgcagtggcatcctgatgttgccactcaacttgttgttgcatctgatgaagatggt
tcaccaactcttaggctttgggacatgcgaaatataatgtcaccagtgaaggagtttgca
gggcacacaagaggtgtaattgcaatggcatggtgtccctctgacagctcttatttactc
acatgtgccaaagataatcggactatttgttgggatacagtaactggagaggctgtctgt
gaattgcctgcaggtaccaactggaactttgatgtgcactggtatccgaagatacctgga
ataatatcagcatcttcatttgacggcaaaattggcatttacaatattgagggctgcagc
cgatatggtgttggggacagcgattttggtacagtgtctttgagagctcctaaatggtat
aaacgtcctgttggggcatcttttggttttggaggaaaagttgtatcttttcgcactcgg
tcatctggttcaggtacttctgcatcatcagaggtatttttgcataacttagttgctgaa
gaaactctggtcagtcgttcatctgaatttgaatccgtcatacagagtggggagaggtct
tcactaagggttttatgtgaaaagaaagaacaagaatctgaatctcaggatgatcgagaa
acttggggcttcttaaaggtgatgtttgaagatgatgggacagcaaggacaaagttgctc
atgcatcttggttttagtctgcccgaagaaaaagatactgtacaagataacatctctcag
attgtaaatgatattacacttgaggataaagtggcagaaaaggtgggcaatgacggtgag
aaagaagctgctcgatttgcagttgataatggggaagacttcttcaacaatcttccgagt
cccaaagctgatacccctgtttcaacatctgaaaataattttgctgtttctgatttaaca
cctcaagaaccagaaggagtggaggaaagctcagatccatcatttgatgatgctgtacaa
cgtgcattggtggtgggtgattataagggagcagttgctcagtgcattgctgcaaataaa
atggctgatgctttagttattgctcatgttggtgatccttccttatgggctagcacatgt
gatcaatatcttaagatgagccgttctccatacctgaaggttgtctctgcaatggtgaac
aatgatctcacgagccttgtcaacaccaggcctttgaagttctggaaagaaacactggcg
ctcctctgtacttttgcccagagagaggagtggactgtactctgtgatacgcttgcttcc
aaactaatggcccatgggaatactctggcagcgactctctgttatatatgtgcagggaat
attgataaaacagtagagatttggtcaaggtgcctgacaactgaacttgatggcaaatct
tatgtcgatcttctccaggatttaatggaaaagaccattgtccttgctttggcaactggc
cagaagcggtttagtgcatccctatgcaagcttgttgagaaatatgctgaaattttggcc
agtcaaggacttttaacaacagcaatggaatacttaaaactattgggttctgatgatctg
tcacccgaactagtgatattaaaagatcgtattgcactttctactgaacctgtgaaagaa
ggtaaatctgctgtttttgagaactctcatccaactggtataccaggctttgagccttca
caacatatatatccggacccagctgcaccacaaattcagccaagtggtcctggtagtgct
tatgatgaaaattatcagcgatccttttcacaatatggagcatatgcacctcctccctca
tatctacctcaagcaccacctgccaacatgtttgttccaacccaagctcctcatatttcc
cagacaaattttgctcctccacctgaaaccactcagcctactgtcagaccctttgttcct
tcaaatcctcctgttctaagaaatgcagatcaataccagcagccaccttctttgggttct
cagttatatccgggtgctgctgatcctacttatcctgctccccctggggctggttcattt
gcacctgtcccatcccaaatgggagcagctcctggccccagaatgccacaagttgtagct
cccgcgccagcacctaggggatttatgccagttactagcacatctgttcaaagacctggt
atgggcccaatgcaaccacccagcactacacagtcagcatcagtacagccggctgcagcg
cctgctgctcctccaccaacagtgcagactgctgatacttcaaatgtacctgcccaccaa
aaacctgtaatcactaccttaactagactttttaatgagacatctcaagcactgggaggt
gcacgtgcaaacccagtgaagaagcgtgaaatggaagacaattcgaagaaaataggcgcc
ttattcgccaaactcaatagtggagacatttcaaaaaatgcttctgataaacttattcag
ctctgccaggctttggacaataatgattttggtacagctctgcaaatccaggttcttctc
actactagtgagtgggatgagtgcaacttttggcttgcaactctcaagaggatgattaag
acaaggcagaatgttagataa

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