Gossypium arboreum (tree cotton): 108469785
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Entry
108469785 CDS
T05776
Name
(RefSeq) CLP protease regulatory subunit CLPX1, mitochondrial-like
KO
K03544
ATP-dependent Clp protease ATP-binding subunit ClpX
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
gab03110
]
108469785
Chaperones and folding catalysts [BR:
gab03110
]
Heat shock proteins
HSP100
108469785
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA
ClpB_D2-small
AAA_5
AAA_22
MCM
Mg_chelatase
Sigma54_activat
RuvB_N
Sigma54_activ_2
IstB_IS21
AAA_16
AAA_7
AAA_14
ABC_tran
AAA_29
DEAD
nSTAND3
T2SSE
ResIII
AAA_24
AAA_28
AAA_23
AAA_18
AAA_30
TsaE
T4_baseplate
NACHT
DUF6300
AAA_33
RNA_helicase
Motif
Other DBs
NCBI-GeneID:
108469785
NCBI-ProteinID:
XP_017626311
LinkDB
All DBs
Position
8:2261889..2271433
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AA seq
667 aa
AA seq
DB search
MSGGLWRRWRKLVVMEHLNCLGHWRRIAVGIGGIQHRFSSGGGADGGGGGGGGGDNYDDN
KKNDVAAGTNGRTKSRGKARTKSSGTATSALTRRIKAEINCPRCSNHNFFNFNLPDASLD
SSDGNSSNGKSTINFCPTCRTAYHFRPHRIYPLQGTFLEIKSNSKAVPTPPPPAPHPRNG
VKTSFWDNLRSENSPPTPPAGNGLAVQTPPGPPFPPGVNFVRADGPKEGHAHGNGTWLGG
ANFGKDLPTPREICKALDKFVIGQQKAKKVLSVAVYNHYKRIYHSSLEKGSGVEEGSLEA
LEDNENVELEKSNVLLVGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESI
LYKLLTVAEFNVEAAQQGIVYIDEVDKITKKAERLNISRDVSGEGVQQALLKMLEGTIVN
VPEKGARKHPRSDNIQIDTKDILFICSGAFIDLDKTISERQQDSSIGFGAPVRANMRTSW
VTNAAVTSSLVESVESSDLIAYGLIPEFIGRFPILVTLSALTEEQLVQVLTEPKNALGKQ
FKKLFSMNNVKLHFTPKALRLIAKKAMAKNTGARGLRAILESILTEAMYEIPDVKTGHNR
VDAVVVDEESVGSTDNPGCGGKILRGDGALKHYFAKTMLKDSIENLSSVEGQSPEAESEV
STRAVSL
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atgtctggaggactgtggaggagatggaggaagctagtggtgatggagcatttgaattgt
ttgggccattggaggaggattgccgtgggaattggtggaattcaacatcgattctccagt
ggcggaggagctgacggcggcggcggcggcggaggaggaggtgacaattatgatgataat
aaaaaaaacgatgttgctgctggtactaatggaaggacaaagagcagaggtaaagctaga
acgaaaagcagtggcactgctacttcggctcttactcgtaggatcaaagcggaaataaat
tgtccgcgatgttctaatcacaatttcttcaatttcaatcttcctgatgcttcgttagat
tcttccgatggtaattctagtaatggaaaatccacaattaatttctgtcctacttgtagg
acagcttaccactttcgtccccatcggatatatcctcttcagggaactttcttggagatt
aaatccaattcgaaagctgttcctactcctcctccacctgctcctcatcctcggaacggt
gttaagacgtcgttttgggataatcttagatccgagaattctccgccaacgccacccgct
gggaatggcctcgctgtgcaaactccgcctggaccgccctttcctcccggagttaatttc
gtgagagctgatgggcctaaggaaggtcatgctcatggtaatggcacatggttgggcggg
gccaattttgggaaggatttgcctacaccgagagagatttgtaaagcccttgacaagttc
gttattgggcagcagaaggcaaaaaaggtgctgtcagttgccgtttataatcactataaa
agaatataccattcctccttggagaaagggtcaggagtagaagaaggaagcttagaagca
cttgaggacaacgaaaatgtggagttagagaaaagcaatgtgctcttggtcggaccaact
ggctctggaaagactttattggcaaaaactctggctcgcttcgtcaatgttccttttgtc
attgcagatgcaacaactttgacacaggctggttatgttggtgaagatgttgaatcgata
ttgtacaaactactcacggtggctgagttcaatgtagaagctgctcaacaaggaattgtt
tacattgatgaagttgacaagataactaagaaggctgaacgcttaaacattagcagagat
gtttcaggggagggtgtacaacaagcattgcttaaaatgttagaaggaactattgtaaat
gttccagagaagggagcaaggaagcatcctcggagtgacaatatacagatagatacgaaa
gacatccttttcatttgtagtggagcatttattgatcttgacaaaacaatttctgagaga
cagcaagattcttcaattggttttggagcacctgtacgtgctaatatgaggacctcgtgg
gtaaccaatgctgctgtgacatcatctttggttgaatcagttgagagttccgatcttatt
gcatatggccttataccagagtttataggacgctttccaatactagttactttgtcagct
ttaactgaggagcaacttgtgcaggtgcttacagaaccaaaaaatgctcttggaaagcaa
ttcaagaagttatttagcatgaacaatgtgaagctacattttacgccaaaagcattgaga
ttgattgctaagaaggcaatggctaagaacacaggtgcaaggggtttgagagctatactg
gaaagcattctcactgaagctatgtatgagattccagatgtaaagacgggacacaataga
gtagatgctgttgtagttgacgaggaatcagtgggttcaacagataaccctggatgtgga
gggaagattcttcgtggagatggtgctttgaagcattactttgccaaaaccatgttgaag
gattctattgaaaacctttcatcggtagaaggacagtcgccagaagctgaatctgaggtt
tcaacaagagccgtgagcttgtag
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