Gossypium arboreum (tree cotton): 108469787
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Entry
108469787 CDS
T05776
Name
(RefSeq) phytoene synthase 2, chloroplastic
KO
K02291
15-cis-phytoene synthase [EC:
2.5.1.32
]
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab00906
Carotenoid biosynthesis
gab01100
Metabolic pathways
gab01110
Biosynthesis of secondary metabolites
Module
gab_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
108469787
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
gab01006
]
108469787
Enzymes [BR:
gab01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.32 15-cis-phytoene synthase
108469787
Prenyltransferases [BR:
gab01006
]
Terpene biosynthesis
Squalene/phytoene synthase
108469787
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-GeneID:
108469787
NCBI-ProteinID:
XP_017626323
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All DBs
Position
7:95126926..95129112
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AA seq
418 aa
AA seq
DB search
MSLKLLWFVSSQSNLGFLHHGNRSLPCPNLLFQHRAGKGKNQRWKPHFCSSRTYVPGSEG
LRRSKVKVTVVSTMAATSSAGEIAMSSEEKVYNVVLKQAALVNKQLRSPRVDVVVPGDLS
LLNEAYDRCGEICAEYAKTFYLGTLLMTPERRRAIWAIYVWCRRTDELVDGPNAPHITPT
ALDRWESRLEDLFNGRPFDMLDAALANTVNKFPVDIQPFKDMIEGMRMDLRKSRYKNFDE
LYLYCYYVAGTVGLMSVPVMGIAPESLASTESVYNAALALGIANQLTNILRDVGEDAQRG
RIYLPQDELAQEGLSDEDIFSGKVTDKWRNFMKKQIKRARMLFHEAEKGIKELNASSRWP
VSASLMLYKQILDEIEANDYNNFTKRAYVSKAKKLIALPVAYVRSLVAPSTIRSSHRN
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgtctttaaagttgctttggtttgtatcttcccaatcaaacttggggttccttcatcat
gggaaccggtccttgccatgtcccaatttgttgttccaacacagagcaggtaaaggtaag
aatcagagatggaaaccccatttttgttcttcaaggacttatgttcctggttcagaaggg
ttaagaagaagcaaggtgaaggtcactgttgtgtcaaccatggcagccactagctcagca
ggtgaaatagctatgtcatcagaggagaaggtttacaatgtggtgttgaaacaggcagct
ttggttaataagcaattgagatcacctcgtgtggatgtcgttgtacctggtgatttgagc
ttgttaaatgaagcatatgatcgttgtggtgaaatttgtgccgagtatgcaaaaaccttt
tatttgggaactttgctgatgacccctgaaagacgtagggctatatgggctatctatgta
tggtgtcggaggaccgatgagctcgttgacggaccaaatgcaccgcatataactcccact
gctttagataggtgggaatccaggttggaagatctattcaacggtcgtccgtttgatatg
ctcgatgccgctttggccaacacggttaataaatttccagtcgatattcagcctttcaaa
gacatgatagaaggaatgaggatggacttaaggaaatccagatacaaaaacttcgacgaa
ctatatctctattgttattatgtagccggcactgtcgggttgatgagtgtgcctgtgatg
ggcattgcacctgaatctttagctagcacagagagtgtgtataatgctgcattagcatta
gggatagctaatcaactcactaatatactcagagatgttggggaagatgcgcaaagggga
agaatttatctaccacaagatgagttagcacaggaaggactatcagatgaggatattttt
agtggaaaagtaacagataagtggaggaacttcatgaagaaacaaataaagagggcaaga
atgttgtttcatgaagctgaaaaaggaattaaagagctaaatgcatcgagtcgatggccg
gtatcggcatcattgatgctatataagcagatattagatgagatagaggccaatgattat
aacaactttacaaagagagcttatgtaagcaaagcaaagaaattaattgccctccctgtt
gcatatgttagatctctcgtggctccatcaacaattcgttcttctcatcggaattaa
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