Gossypium arboreum (tree cotton): 108469795
Help
Entry
108469795 CDS
T05776
Name
(RefSeq) sister chromatid cohesion 1 protein 4-like
KO
K06670
cohesin complex subunit SCC1
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gab03036
]
108469795
Chromosome and associated proteins [BR:
gab03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
108469795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rad21_Rec8_N
Rad21_Rec8
CNDH2_N
Motif
Other DBs
NCBI-GeneID:
108469795
NCBI-ProteinID:
XP_017626329
LinkDB
All DBs
Position
3:40229194..40238507
Genome browser
AA seq
1130 aa
AA seq
DB search
MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPDVPIALRLSSHLL
LGVVRIYSRKVNYLFDDCSEALLKIKQAFRSTAVDLPPEESTAPYHSITLPETFDLDDFE
LPDNEIFQGNYVDHHVSSREQITLQDTMDGVVYSTSQFGLDERFGDGDTSQIGLLDEELV
LDRVASSKHAGVSEYDPQGSDVPQEQVPSNSEAMPMDCSGDQVEDLAANSEFIDYDQDPG
TPGLVEVPNLSGVHEALAGGDHAEPEHDNLTELANSKCVENASNKSNLHHEDNKPLDQSL
ENEINHDAVVIEPPENNCHISDMEKEQNKPQESSLPDAVSVECASAIGTVRGPDGLDRVE
EMHNGGTHSIDRTDRECAESPSCSNVTFDLDEPARRTSSNSTCVPVSDGNLENDQALQKF
EFGNQAEAAGNLEESHGKAIASNPSCPLESPSRPTVIDGEAQAFQEPNVSENLKETGIHE
EVSSVQVLGSNNLAAAEQNSVDLSQREEEVHASGAPIEVQGEVCQTQMVEPAFCGHQLEN
SNSCAMSDLPAPERLLSAPEELLDKPSDLLVESTPDKEVLAGNDEIDAGTKLISGKKRSL
TESTLTVESINSVESFGRPQSMRTAESVPDDDDLLSSILVGRKSSVFKMKPTPQFEVASR
KRTRSAAKPSATKRKVLMDDTMVLHGDTIRQQLVNTEDIRRIRKKAPCTRSEISLIQRRF
LEDEIFSESVLTGMSGDLTRLHSEQYDLSSIRISEGDQNHASNEVAKDSGCSVRPDIAEG
GIEGSSVPLINGHDEQAQSVGITVHTKTQLGEYSDLNEGTTVHTETQQGEHSDLNSQQDR
NPVDGITEMEIDKDNAEAVNASNHFVLNEFGLSSPTNLGTEFLLEESKANTSADGSIAEC
FAPIENGTNSLVTLQTGESVNGSQNAYEAENDKVDVIDEAQVEVALLDHDDKDPIRKDIE
ECKMDSTYSENVDVVLNNASLNTGETSTFQEVDAVNKEMTSLVDNQAEFEDVAIGNDTEF
LNVDDDELGEDDDNGMPGGDESRLLENSGWSSRTRAVAKYLQNLFEDEAVHGRKTLSMDS
LLARKTRKEASRMFFETLVLKTKDYIHVEQGKPFDDICIKPRLKLLKSDF
NT seq
3393 nt
NT seq
+upstream
nt +downstream
nt
atgttttattcacagtttatattggcgaagaaaggtcccttgggtacgatatggatagca
gctcatctggagaggaagctccgtaagaatcaggtggctgatactgacatcggtgtttct
gttgactctattctgtttcctgatgtaccaattgcactacgattgtcaagtcatcttctt
ctcggagtggtgaggatatattctagaaaggtgaattacctttttgatgattgcagtgaa
gccttgcttaagataaagcaggcttttcgctccactgcagttgatttgccaccggaagaa
tcaactgcgccgtaccattcaatcactttgccagagacttttgatcttgatgactttgag
ctgcctgataatgagatctttcagggtaactatgttgatcatcatgttagctcaagagag
cagattacgcttcaagataccatggacggtgttgtttactccacatcacaatttggattg
gatgaacgttttggtgatggtgacacttctcagattggtctgcttgatgaggagcttgtc
ctggatagggttgcatcatccaaacacgctggagtgtcagaatatgatccccaagggtca
gatgtaccacaagagcaagtcccaagtaattcagaagctatgccaatggattgcagtggg
gatcaggtagaagatctcgctgcaaattcagaatttattgattatgatcaagatccaggt
actcctggattagtggaggtgcctaacttgtctggtgttcatgaggcactggcaggtggt
gatcatgcagaaccagaacatgacaatcttacagaattggccaactcaaagtgtgtagaa
aatgcttctaataaatcaaatcttcaccatgaagataacaaaccattggatcagtcattg
gaaaatgaaataaatcatgatgctgttgttatcgagcctcctgagaacaattgccatatt
agtgacatggagaaagaacaaaataaaccacaggaaagttctctccctgatgctgtgtct
gtggagtgtgcatctgctattgggactgtcagaggacctgatggtttggatagggtggaa
gagatgcataatggcggtacgcactcaattgatagaactgacagggaatgtgcagaatct
cctagctgctccaatgtcacctttgatttggatgaacctgctcgaagaacaagttcaaat
agcacctgtgtgcctgtgtcagatggcaatttggaaaatgatcaagcattacaaaaattt
gaatttgggaatcaagcggaagccgctggtaatttggaagaatcacatggcaaagcaata
gcttcaaatccttcctgtccattggaatcacctagtaggccaacagtaattgatggagaa
gctcaagcttttcaagaaccgaatgtctctgaaaatcttaaagaaactggtattcatgaa
gaggtgtcgtctgttcaagttcttgggagcaataatttggctgctgctgagcagaactct
gtggatctgtcccaaagggaggaggaagttcatgcttctggagctccaattgaggtgcaa
ggtgaagtctgccaaactcagatggtggaacctgctttttgtggtcatcagttggaaaat
tcaaatagttgtgctatgtctgacttgcctgcacctgaaaggttactctctgcaccggaa
gaactgcttgataaaccaagtgatttgctggttgagtctaccccagacaaagaggtccta
gcagggaatgatgaaattgatgctggaacgaaactcatttcaggaaaaaagcgaagttta
actgaaagtacactaactgtagagagtataaactcggttgaatcatttggcaggcctcaa
tccatgagaactgcagaatcagttcctgatgatgatgacttgttgtcttctattttagtt
gggagaaaatcttcagtttttaaaatgaaaccaactcctcagtttgaagttgcatcaagg
aaacgcacacgatctgcagcaaaacctagtgccaccaagagaaaagttcttatggatgat
actatggttttacatggcgatacaatacgtcagcagttggttaatactgaagacatacgt
cgtattcgcaagaaagcaccttgcactcgctctgaaatttcattgattcagagacgattc
ttggaagatgaaatctttagtgaatctgtacttactggtatgtcgggtgacttgacacgt
ttgcacagtgaacaatatgatctaagcagtatcaggatttctgaaggtgatcaaaaccac
gcatcaaatgaagtagctaaggattcagggtgctctgtcagacctgatattgctgaaggt
ggaattgaagggagctctgtgcctttaattaatggccatgatgagcaagcacagtctgtt
ggtattactgttcacaccaaaactcagctgggtgaatacagtgatctgaatgagggtact
actgttcacactgaaactcagcagggtgaacacagtgatctgaattctcaacaggataga
aatcctgtcgatgggatcacagaaatggaaattgacaaagataatgctgaagctgttaat
gcatcaaatcactttgttctaaatgagtttgggttgtcatccccaactaatcttggtact
gagtttttgttggaagaaagtaaagccaatacatcagctgatggtagtatagcagaatgc
tttgcacctattgaaaatgggactaattctcttgtcactttacaaactggtgagtctgtg
aatggttctcaaaatgcatatgaagctgaaaatgataaggttgatgtgatagatgaggct
caagttgaggttgcactcttggatcatgatgacaaggaccctatccgtaaggatattgaa
gaatgtaaaatggattctacatattcagaaaatgttgatgtggttctgaacaatgcttca
ttaaatacgggagaaacctcaacctttcaggaagtcgatgcagtcaataaagaaatgacc
tctcttgtggataatcaagctgagtttgaggatgttgccattggaaatgatacagaattc
ctgaatgtagatgatgatgagctaggtgaagatgatgataatggcatgccgggcggtgat
gaaagtcgtcttcttgaaaatagtggatggtcttctcgtaccagggctgttgccaagtat
ctccagaatttattcgaggatgaagctgtacatggacgtaagacactttctatggacagt
ctattggctcgtaaaacacgtaaagaggcatcgaggatgtttttcgaaacactggttctt
aagacaaaagattacatccatgtagaacaggggaaacccttcgatgatatctgtataaag
cctcgattgaagctcttaaaatcagatttctga
DBGET
integrated database retrieval system
