Gossypium arboreum (tree cotton): 108469888
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Entry
108469888 CDS
T05776
Name
(RefSeq) E3 ubiquitin-protein ligase RGLG3 isoform X1
KO
K16280
E3 ubiquitin-protein ligase RGLG [EC:
2.3.2.27
]
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gab04121
]
108469888
Enzymes [BR:
gab01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108469888
Ubiquitin system [BR:
gab04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
108469888
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Copine
zf-C3HC4_3
Prok-RING_4
vWA-TerF-like
zf-C3HC4_2
zf-RING_2
zf-RING_5
zf-C3HC4
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
108469888
NCBI-ProteinID:
XP_017626469
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All DBs
Position
12:complement(31183974..31191894)
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AA seq
403 aa
AA seq
DB search
MGNTESGYDDSLQTDFWHQPSYEPSSLAGSSMDRNYQPRQQAPFIPDNFSSLDQVISALR
EAGLESSNLILGVDFTKSNEWTGRYSFNRRSLHAIGSSPNPYEQAISIIGRTLSPFDEDN
LIPCFGFGDASTHDKYVFSFYPDHRPCHGFEEALARYKEIVPHIKLAGPTSFAPIINASI
DIVDSSNGQYHVLVIIADGQVTRNPDVPRGRLSPQEQETVDSIVAASHYPLSIILIGVGD
GPWDSMQQFDDNIPHRAFDNFQFVNFTKIMSENTETSKKEAAFALAALMEIPYQYRATLS
IRFDNRELERGLARPLPPPREVIEHDNSIRSIPHMTNYETVQPTAPAEPVISSAVEPVCA
ICLVNPKDMAFGCGHMTCKDCGATISSCPMCRQPITTRLRLYT
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgggaaatacagaatcaggatatgatgattcgcttcaaactgacttttggcatcaacct
tcttatgaaccttcttccctagcaggaagttcaatggatcgaaactatcaacccaggcag
caagccccgtttatacctgacaattttagttctttggatcaggttatttcagcattgaga
gaggcaggacttgaatcatccaatttaatacttggtgttgacttcactaagagcaatgaa
tggacagggcggtattcattcaacagaagaagccttcatgctattgggagctcacctaat
ccttatgagcaagcaatatctataattggtcgtactttatctccttttgatgaagataat
ttaataccttgttttggttttggtgatgcatcaacgcatgataaatacgttttcagcttt
tatcctgatcaccgaccttgtcatggttttgaggaagctcttgcacggtataaagagatt
gttccgcacataaagttggcaggtccaacttcatttgctccaattattaatgcttctatt
gacatcgtggatagcagtaatggacagtaccatgttcttgtcatcattgcagatggacag
gttacaaggaaccctgatgtaccgcgtggaaggcttagtccacaagaacaagaaactgta
gattccatcgttgctgctagtcattatcctctctcgattattttgattggagtgggggat
ggaccatgggattcaatgcaacaatttgatgataatattccacatcgtgcctttgacaac
ttccagtttgtcaacttcacaaaaatcatgtctgagaatacagaaacgtcaaagaaagaa
gcagcctttgctcttgctgctctcatggaaattccgtatcagtacagagctaccctgagt
attcgttttgataatagagaactagaacgtggacttgcaagaccacttccgcctccacga
gaagtgatcgaacatgataattccattcgatcgatcccacacatgactaattatgaaaca
gtgcagccaacagcccctgcagaacctgtaataagttctgcagtagaaccggtttgtgct
atctgcttggtaaacccaaaagacatggcttttgggtgtggtcacatgacttgcaaggac
tgtggggcgacaatttcatcatgtccgatgtgccggcagccaataacgacacgcctgaga
ctgtatacctaa
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