Gossypium arboreum (tree cotton): 108469956
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Entry
108469956 CDS
T05776
Name
(RefSeq) cryptochrome-1-like isoform X1
KO
K12118
cryptochrome 1
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
108469956
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Motif
Pfam:
FAD_binding_7
DNA_photolyase
Cryptochrome_C
Motif
Other DBs
NCBI-GeneID:
108469956
NCBI-ProteinID:
XP_017626579
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Position
5:complement(20911551..20916089)
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AA seq
685 aa
AA seq
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MSGSACSIVWFRRDLRVEDNPALAAGVRAGAVVAVFVWAPEEEGHYYPGRVSRWWLKHSL
AHLDSSLRSLGTCLITKRSSDSVSSLLEVVKSTGATQLYFNHLYDPISLVRDHRAKEVLT
AHGVAVRSFNADLLYEPWDVNDAQGRPFTTFSAFWERCLSMPYDPEAPLLPPKRIISGDV
TTCHSDELVFEDESEKGSNALLARAWSPGWSNADKALTTFINGPLIEYSKNRRKADSATT
SFLSPHLHFGEVSVRKVFHLVRIKQVLWANEGNKAGEESVNLFLKSIGLREFSRYLSFNH
PYSHERPLLGHLKFFPWVVDEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSS
FFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTLPDGREFDRIDNPQFEGYKFD
PHGEYVRRWLPELARLPTDWIHHPWNAPESVLQAAGIELGSNYPLPIVGIDAAKDRLQEA
LSVMWQQEAASRAAIENGTEEGLGDSSESAPFAFPQDIQMEENVEPARNGAPATTRRYED
QMVPTMTSSLVRGIHEEASSDLRTSTEDSRAEVPRNINIHQEPQRDSLNQGIQQTARNNN
TFRQFNLPMGLGNAEDSTADSSTSSSRRERDGGVVPVWSPPASSYSEQFIGDENGIATSS
SYLPRHPQSHQIVNWRRLSQTGENY
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggtagtgcttgcagcatagtttggttcagaagggatctgagagttgaagataat
ccagcacttgcagctggtgttagagctggcgctgttgttgcggtttttgtatgggcacct
gaagaagaaggccattattaccctggcagggtgtcaaggtggtggctgaagcacagtttg
gctcaccttgattcttctttgaggagccttggtacttgtctcatcactaagagatcttct
gatagtgtttcctctctgcttgaggttgttaaatctactggtgctactcagctctacttc
aatcacttgtatgatcctatatcactggttagggatcatcgggcaaaggaggtattaaca
gcccatggtgtagcagttcgatcgttcaatgcagatttactttatgaaccctgggatgta
aatgatgctcaaggacgccctttcactactttttctgctttctgggaaagatgcctgagc
atgccctatgatcctgaggctccacttcttcctcctaagagaatcatttcaggcgatgtg
acaacttgccattcggatgaattggtgtttgaagatgaatcagagaagggaagcaatgcg
cttttagctcgagcatggtcacctggttggagtaatgctgataaggctttgaccacattc
attaatggacctctaattgagtactctaagaatagaagaaaggctgatagtgccaccacc
tcatttctctctccccacttgcactttggggaggtgagcgtcagaaaagtctttcatctt
gtccgcatcaagcaggttctatgggccaatgaagggaataaagctggtgaggagagtgtt
aacttgtttctcaagtcaattggtctgagggaattttcaagatacttgagttttaaccat
ccttacagccatgaaaggcctcttcttgggcatcttaagtttttcccttgggtagtggat
gagggctattttaaggcatggagacaaggtagaactggttatccattggtggatgctggc
atgagagagttgtgggccactggctggctacatgaccggataagagttgtagtttcaagt
ttctttgtgaaggttctgcagcttccatggagatggggtatgaagtacttttgggatacc
ttattagatgcagatttagagagtgatgctcttggttggcagtatatatccggtactctt
ccggatggccgtgagtttgaccgcatagataatccacagtttgagggttacaaatttgac
ccacatggagaatatgtccgaaggtggctccctgaacttgcaagattgccaacagattgg
attcaccatccatggaatgctcctgaatctgtactccaagctgctggaattgagctcgga
tcaaattaccctcttcctattgtaggaatagatgctgcaaaagataggttgcaagaagca
ctttcggtgatgtggcagcaagaagctgcttcaagagctgcaattgagaatggaactgaa
gaaggccttggagactctagtgaatcagcgccatttgccttccctcaagacatacaaatg
gaggaaaatgttgaaccagcaaggaacggtgctccagctacaactcggcgatacgaagat
cagatggttcctaccatgacttcttctttggtgagaggcatacatgaagaagcttcttcg
gatcttagaacttcaacagaagatagcagagcagaagttccaagaaacattaatatacat
caagaaccacaaagagactcattaaaccagggaattcagcaaacagctcgtaacaacaac
acttttcggcaatttaatctgccaatggggttgggaaatgctgaggattccacagcagat
tcatctactagcagtagtaggagagaaagggatggcggagttgttccagtttggtctcct
ccagcttctagttattcagagcagttcataggtgatgaaaacggtattgctacgagctca
tcttatttaccaaggcatccacagtcccaccaaatagtaaactggaggcgtttatctcaa
actggggaaaactattga
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