Gossypium arboreum (tree cotton): 108470010
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Entry
108470010 CDS
T05776
Name
(RefSeq) indole-3-acetic acid-amido synthetase GH3.17-like
KO
K14487
auxin responsive GH3 gene family
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
108470010
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Motif
Pfam:
GH3
GH3_C
GH3_M
Motif
Other DBs
NCBI-GeneID:
108470010
NCBI-ProteinID:
XP_017626673
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Position
8:139515095..139518288
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AA seq
591 aa
AA seq
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MATNDYESVLKMLEEITTNARQIQEQLLDEILRKNAETEYLQGFLHDQTDKQLFKKNVPI
VTYDHIKPYIDRIANGKASSDILLVEPLIGFSLSSGTSGGQPKLIPITAESANVTAALGN
LHLSLMIKHFGDLSQVGKRMELLFAKPDVETPCGLKASAVTTRAFKESSFQAILPKLYTS
PYETIFCSDTKQSTYCQLLFGLIQRDEVVVIGSIFAATVLRGIKFIENNWRELCSNIKTG
KISDWITDSGCRKAASLILKPNPKLADLLEDICSCKSWEGIVRKLWPRTKYIGTVCTGAM
LQFTAELEFYCGGLPLVSGFYACSEGAIAINLEPLSKPSDVSYTILPNTVYYEFLPIKED
CVTDSQNQVQLHTSRHKDTETVDLVNVKPGQCYEILVTSPTGLYRYRVGDIIKVTGFHNN
TPQFQFVGRQNVALGVDMERTSEADILKAVAEAKALLEPLGLILTEYTSYGDTSSAPGHY
VIFWEIKPKKDNKKNGKELDPKVMEQCCSKMEDSLHFTYRMYRKENIIAALEIRVVKQGA
FEALLDYFVSNGASLSQYKTPICIKTKEALNILDSRVIAKFFSPRTPIQDN
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atggcaacaaatgattatgaaagtgtgttgaagatgttggaggaaataacaacaaatgct
cgacaaatccaagagcagttattggatgaaatactgagaaaaaatgctgaaactgagtat
ttacagggattcctccatgaccaaaccgacaagcaactcttcaaaaaaaatgtacccatt
gttacttacgaccatatcaagccttacattgatcgtattgctaatgggaaggcatcatct
gatatacttttagttgaacccctcattgggttctcattaagctccgggacttcgggtggg
cagccaaagctgatacctatcacggctgaaagtgctaacgtaacggcggcattgggtaac
ttgcacctatctttgatgatcaagcactttggtgacctaagccaagttggtaaaagaatg
gaacttttgtttgccaaaccagacgttgaaacgccttgtggcctcaaggcaagtgcagtc
acaacgagagcattcaaggagagtagctttcaagccattttgcccaagctttacactagc
ccttatgagactatcttctgctcggacaccaaacaaagcacgtactgtcagttacttttt
ggtttaatacaacgtgatgaggtcgtggtgattggctcaatcttcgcagctacggtttta
agaggtatcaagttcatagaaaataactggcgagagctatgctctaatataaaaacaggt
aaaataagtgattggatcaccgactcgggatgcagaaaagcagcatcattgatcttgaag
cctaatcccaaattggctgacttgctagaagacatatgtagttgtaaatcatgggaagga
atagtgagaaagctatggcctagaacaaagtacattggtaccgtatgtacaggtgccatg
ctacaatttactgcagaacttgagttctattgtggtgggctaccattagtgtcaggtttt
tatgcttgctcggaaggtgccatcgcgatcaacttagaacctctatctaaaccttcagat
gtctcttacacaatcctccccaatacggtttactatgaattccttccgatcaaagaagac
tgtgttacagattctcaaaaccaggttcagttacacacgtctcgccataaagataccgaa
actgttgatcttgtaaacgtgaagcctggtcaatgttatgaaattcttgtcacatctcct
acaggattatatcgatatagagtcggagacattattaaggtgaccggtttccacaacaat
acacctcagttccaatttgttgggaggcaaaacgttgctctaggcgtcgatatggaaaga
acaagtgaagcagacatcttaaaggcagtggcagaagcaaaggcacttctcgagccgctc
ggactcatcttaacagaatacactagctacggtgatacatcttcagcaccaggtcactat
gtcatattctgggagattaagccaaaaaaagacaacaagaagaacggtaaagaacttgac
ccaaaggtaatggaacaatgttgctctaaaatggaagattcattgcattttacatataga
atgtataggaaggaaaacataattgcagctttggagattagggttgttaaacaaggagct
tttgaggcattactggattactttgtgtccaatggagcttctttgagccaatacaagaca
cctatttgcatcaaaactaaggaagctttaaatatattggattcaagagttatagccaag
tttttcagcccaagaactcctatacaagacaactaa
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