Gossypium arboreum (tree cotton): 108470037
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Entry
108470037 CDS
T05776
Name
(RefSeq) branchpoint-bridging protein isoform X1
KO
K13095
splicing factor 1
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108470037
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gab03041
]
108470037
Spliceosome [BR:
gab03041
]
Complex A
Other components
Complex A specific factors
108470037
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Gene cluster
GFIT
Motif
Pfam:
KH-I_KHDC4-BBP
SF1-HH
KH_1
Motif
Other DBs
NCBI-GeneID:
108470037
NCBI-ProteinID:
XP_017626704
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Position
8:complement(140943196..140949110)
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AA seq
856 aa
AA seq
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MSTKVDQISAVGPHIANMSATTTSSTASTTGPKVSRFAAKTGFVIPKNKLSGSLVPIFRG
GKKPGGNATTNEDNMDQIQRKTKWGPDPTQDAAVRRGRALAYQTRVDQITQQLKSGNLDA
GDTEDSPFVSQNMVKSTSDTQLESEKLELLEIERREAIGEILKLNPSYKAPADYKPLLKD
ATVPIPVKEYPGCNFVGLIFGPGSDTKKRLEKETGAIVQVYGIKANTGEKVEISTPDGNE
TQDAYEELYVHLSADTFEKVDGAVALIELLVSSISGNLGAGSVPAISGNDVNVLSQIPDT
AVSCVTDAALNQQVPQLTLASPQGQFQYQNSWFPTSSMPLNFSAPVINSSVPAQSSPSNP
SSLFGPRPPPAAGYNSIVQNSSLVSSSPQLPRQVQSQPYMPLMHPLSHTGPQNFLIPNPN
PPSSQPGNFSSLPFTGNQPHALGPLPGPRPSMPLFPQAASNVSSGLLKEQPAVPAGSSSG
WSASSASPGLSNVGQLAPPAVLSQVPHPVVPRPVVALSSSAPPNMSASFATGQSGPRLTS
APVNHPSLPFPPGPPLVSAPPPMQSSLPAISMAQPPNPSLNPAMLSRPIISQVPSTSLPP
SLPRGTSGSIPGNMANFAPINQPSAIAARSQQSSSGDFTFQPHQTQGPAYPMVPRPVSQA
ANQHGLAPRSAVHLQPPQAPPFQFGVPNSTPQSGMQVFPRPQGGNQMGLPQTLMSSSQLA
AQQNAMSARPPAFPGTGPNPVPQMGLRNFVPPPQAPNIAGSFPSRPGHSLQHQQHYPPLP
PRPGNFAPPNPRFSSSGFPQSTRSTSGHSAGQQVYDPFSPTSVPGASQHQGGGKANARKQ
DSDPEYEDLMASVGVK
NT seq
2571 nt
NT seq
+upstream
nt +downstream
nt
atgagtacaaaggttgaccagatatctgctgttggacctcacattgccaatatgtctgca
acaactacttcatccactgcatcaactacaggcccaaaggtctcaaggtttgctgcgaag
actggctttgttatacctaaaaataaattgtcaggttcactggtccctattttccgagga
ggtaaaaaacccggaggaaatgctactaccaatgaagataatatggaccagattcagagg
aaaacaaaatggggccctgatccaacacaggatgctgctgttagaaggggtagggcctta
gcttatcagactcgggtggaccagattacgcaacagctgaagtcaggaaatctggatgcc
ggggataccgaagactcaccattcgtgtctcagaatatggttaaaagcacttctgatact
caacttgaaagtgagaaattagaactcttggagattgaaagacgggaggctattggtgaa
atactaaaattgaatccaagctacaaagcaccagcagattataaaccattattgaaagat
gcaacagttcccattcctgtgaaggaatatcctggatgcaattttgttggtctaatattt
ggtcccggaagtgatactaagaagcgactagaaaaggaaactggagctatagtacaagtt
tacggcattaaagcaaatactggagagaaggttgaaatttctactcccgatggtaatgaa
acccaggatgcttatgaagagctgtatgttcatctatcagctgacacttttgagaaagtt
gatggagcggtggcgctgattgagttgctagttagttcaatatcaggaaatttaggtgct
ggttcagtgcctgcgatatctggtaatgatgtgaatgttctaagtcaaatccctgacaca
gctgtatcatgtgtgactgatgctgctttaaatcagcaagttccacaacttacactagca
tctccacaaggtcagtttcaatatcagaattcatggttccctaccagctctatgccgctg
aatttttcagcaccagttatcaatagttctgtacctgcacagtcctcaccttcgaacccg
tcttcactctttgggccacggccacctcctgcagctggatacaactcaattgttcaaaac
tcatcccttgtttcatccagtccacaacttccaagacaagtacaatcacagccatatatg
cctctgatgcatcctctaagtcatactggtcctcaaaattttcttatcccgaatccaaat
cctccatcttctcaacctggcaatttttcttcactaccttttactggaaaccagccccat
gcgctggggccactccctggccctagaccgtcgatgcctttgtttccccaagctgcatct
aatgtttcatcaggactgctaaaagagcagccagcagtacctgcaggaagctcctcaggc
tggtcagccagctctgcatccccaggtctgagcaatgtagggcaactggctccacctgca
gttctatcccaggtgcctcatcctgtagttccacggccggttgttgcattgagttcttct
gcccctccaaacatgtcagcttcttttgcaaccgggcaatctggtcctcggttaaccagt
gcacctgtcaaccatccatccttgccttttcctcctggtcctccactagtgtctgcacca
ccaccaatgcaatcctctttacctgccatttccatggcacaaccgccaaatccatctcta
aatccagcaatgttatctagaccaattatctcacaagtaccatccacatccttgccacca
tctctgccaagaggaacttctggttctattcctggaaacatggcaaattttgctcccata
aatcaaccttcagcaatagctgctagatcacaacagtcaagttcaggggattttacattt
caacctcaccaaacacagggcccagcctatccaatggttccaagaccagtcagtcaggct
gcaaatcaacatggtctagcccccagatcagcagttcacctgcaaccaccacaagctcca
cctttccagtttggtgtgcccaattccactcctcaatcaggaatgcaagtgtttcctagg
cctcagggtggcaaccagatgggtttgccacaaactctcatgtcttcttcacagctcgct
gctcagcaaaatgccatgtctgccagacctccagcattcccgggcaccggtcctaatcca
gttccacaaatgggattgagaaactttgttccacctccccaagcacccaatattgccggt
tcctttccttctaggccagggcattctttgcaacatcaacagcattacccacctctgcca
cctaggccgggaaatttcgcacctccaaacccccgattttccagcagtggtttcccacag
tccactaggtctacatcgggccattctgccggacagcaagtttatgatccattctctccc
acttctgttcctggggcatctcaacaccagggaggtggtaaagcaaatgcaaggaaacag
gacagtgatcccgagtatgaagatttgatggcttcagtaggagtaaagtag
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