Gossypium arboreum (tree cotton): 108470053
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Entry
108470053 CDS
T05776
Name
(RefSeq) vacuolar protein sorting-associated protein 53 A
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gab04131
]
108470053
Membrane trafficking [BR:
gab04131
]
Protein recycling
Others
EARP complex
108470053
Endosome - Golgi transport
Tethering complex
GARP complex
108470053
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps53_N
VPS53_C
RINT1_TIP1
COG4_N
MUN
COG7
Vps54_N
MPH2
DUF401
LXG
Motif
Other DBs
NCBI-GeneID:
108470053
NCBI-ProteinID:
XP_017626725
UniProt:
A0A0B0MIR1
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Position
8:15335138..15345713
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AA seq
824 aa
AA seq
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MDKMSTLEYINQMFPTEASLSGVEPLMQKIQSEIRRVDAGILAAVRQQSNSGTKAKEDLA
AATHAVEELTYKIREIKTKAEQSEMMVQEICRDIKKLDFAKKHITSTITALHRLTMLVSA
VEQLQIMASKRQYKEAAAQLEAVNQLCSHFEAYRDIPKITELREKFKSIKQILKSHVFSD
FSSLGTGKESEETNLLQHLSDACLVVDALEPSVREELVNNFCSRELTSYEQIFEGAELAK
LDKTERRYAWIKRRMRTNEEIWKIFPTSWLVPYRLCIQFCKKTRKQLEGILDNMKEKPDV
ATLLMALQRTLEFEDELAEKFGGGTQSREIGNEIEEIGRQNNSQSASDIRKKYEKKLAAH
QGSENEEKDGNKDLSAPGAGFNFHGIISSCFEPHLIVYIELEEKTLMENLEKLVQEETWD
VEEGSQNNVLSSSMQLFLIIKRSLKRCSALTKSQTLYNLFKVFQRVLKAYATKLFGRLPK
GGTGIVAAATGMDGQIKTSDRDERVICYIVNSSEYCHKTSGELAESVSKIIDSQFADRVD
MSEVQDEFSAVITKSLVTLVHGLETKFDAEMAAMTRVPWGTLESVGDQSGYVNGINMILS
SSIPVLGSLLSPIYFQFFLDKLASSVGPRFYMNIFKCKQISETGAQQMLLDTQAVKTILL
EIPSLGRQTSGAAGYSKFVSREMSKAEALLKVILSPVDSVADTYRALLPEGTPMEFQRIL
ELKGLKKSDQQSILDDFNKGSPAISRPSSAAPVGQSMAPAPPASTVPAISNPASAGFIAS
REDVLTRAAALGRGAATTGFKRFLALTEAAKDRKDGPFRKLFNA
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atggacaaaatgagtactctagagtacatcaaccagatgtttcccacagaggcttcttta
tctggcgttgagccactaatgcaaaagatacaaagtgagatccgtagagttgatgctgga
atactggctgctgttcgccaacagagtaattcaggaaccaaagctaaggaagatcttgct
gctgctacacatgctgtggaggaactaacatataaaatccgtgaaataaaaacaaaagct
gagcaaagtgagatgatggttcaagaaatatgccgcgatatcaagaagctggactttgct
aagaagcatataacctctacaattacagctcttcatcgtctaaccatgctagtctccgct
gtagaacaacttcaaattatggcgtcaaaacgacaatataaggaggcagctgcccagtta
gaggctgtaaaccagctttgcagccattttgaagcctacagggatatcccaaaaatcaca
gagctaagggagaagtttaagagtattaaacaaatactgaaatctcatgtcttctctgat
ttctcaagcttaggaaccggcaaagagtccgaagagacaaatttgctgcagcacttgtct
gatgcttgtttagttgtcgatgccttggagccatctgtgagagaggagttagtaaataac
ttttgcagcagagagcttacttcatatgaacagatctttgaaggagctgaactagctaaa
ctggataaaacggaacgaagatatgcatggatcaaacgtagaatgagaacaaacgaggaa
atatggaaaatctttcctacctcttggcttgttccttaccgtctctgtatccagttctgt
aagaagacaaggaaacaattggaggggatccttgacaacatgaaagagaagcctgatgtt
gcaacgttgctgatggcattgcaaagaactttagaatttgaggatgagttggcagagaaa
tttggtggtggtactcagagtagagagattggaaatgaaattgaagaaattggtaggcag
aataatagtcaaagtgcatcagatattcgaaagaagtatgagaaaaagcttgctgcacat
caaggaagtgaaaatgaggaaaaggatggaaacaaagatttgtctgcacctggagctggg
ttcaacttccatgggattatttcatcttgctttgagcctcacttaattgtatatatagaa
ttagaagaaaagacgctgatggagaatctcgagaaacttgttcaggaggaaacatgggat
gttgaggaaggaagtcagaataatgttctttccagtagtatgcagttgtttctcataatc
aagagaagcttaaagcgatgcagtgctctgacaaagagccaaactttatataatttgttc
aaggtgtttcaaagagtcctcaaagcctatgctacaaagctttttgggagactgccgaag
ggtggtacagggattgttgctgcagccactggtatggatgggcagataaagacatctgac
agggacgaaagagtgatctgctatatcgtaaattcatctgaatattgccataaaacgtct
ggtgaactggctgaaagtgtatccaaaatcatcgattctcaattcgcagaccgggtggat
atgtctgaagtgcaggatgaattttcagcggttataaccaaatctttagtaaccttggtg
catggcctggaaactaaatttgatgctgaaatggctgcaatgacccgtgttccatggggt
acccttgaaagcgttggggaccaatcaggatatgtcaatggcataaatatgatccttagc
agtagcattcctgtacttgggagccttctttcacctatttacttccagttcttcttggac
aagcttgcatcatcggttggcccccggttctacatgaatattttcaaatgcaagcagata
tcagaaactggagcccagcaaatgctgttggatactcaagctgtaaagacaattcttttg
gaaattccttcacttggtcgacagacatctggtgctgctggctattcaaaatttgtaagt
agagagatgagcaaagctgaagcacttttgaaggttatactatctcctgttgattcggtt
gcggatacataccgggcattgctaccagagggaacaccaatggagtttcagcgaattcta
gagcttaagggcctcaagaaatcggaccaacaaagtatcttagatgacttcaacaaaggt
tcgccagcaatctcacgaccttctagtgcagcaccagttgggcaatcgatggcaccagcc
ccacctgccagtacagttccagccatttcaaatcccgcttcagctggatttattgcttct
cgggaagatgtgctaacaagagcggctgctcttggacgtggtgctgcgacaacagggttc
aagaggttccttgctttaaccgaagctgccaaggaccgtaaagatggacctttcagaaag
ctcttcaatgcatga
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