Gossypium arboreum (tree cotton): 108470060
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Entry
108470060 CDS
T05776
Name
(RefSeq) EIN3-binding F-box protein 1-like isoform X1
KO
K14515
EIN3-binding F-box protein
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab04016
MAPK signaling pathway - plant
gab04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
108470060
04075 Plant hormone signal transduction
108470060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gab04121
]
108470060
Ubiquitin system [BR:
gab04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
108470060
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Gene cluster
GFIT
Motif
Pfam:
LRR_6
LRR_RPS2
F-box-like
F-box
LRR_At1g61320_AtMIF1
Motif
Other DBs
NCBI-GeneID:
108470060
NCBI-ProteinID:
XP_017626737
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Position
8:1303224..1307167
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AA seq
636 aa
AA seq
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MPALVNYVVDDDFYSGGSFYTNSTDLGRLCSISSQVDVYYPPRKRARITAPFVVGETLFE
QSKQASIDVLPDECLFEIFKRLPGGRERSSCACVSKHWLMLLISIRKGEYESSKAVKENT
DSVSDEDDGYLTRCLEGKKATDMRLAAVAVGTTGHGGLGKLSIRGSSSSSGVTNFGLSAI
ARGCPSLKALSLWNVPRVGDEGLSEIAKECHLLEKLDLCQCPSVSNKGLIAIAENCPNLT
SLSIESCPKIGNEGLQAIGKLCPKLQAVSVKDCLLVGDHGVSSLLSSTSSLLSKVKFQGL
NITDFSLAVIGHYGKSVTNLMLSGLENVSEKGFWVMGNAQGLQKLVSLTITSCRGVTDVS
LEAMGKGCANLKQMCLRRCCFISDDGLVAFAKSAGSLESLQLEECNRITQSGTIGVLSNC
SLKSLTVVKCMGIKDISSEVPLSCCNSLKSLSVRNCPGFGTAGLAVAGRLCPQLQHVDLS
GLCGITDAGLLPLLESCEAGLVKVNLSGCLNLTDEVVLALTRLHGGTLELLNLDGCRRIT
DASLMAIAESCVFLSDLDVSRSAVTDSGVAALSRAEQLNLQVLSFSGCSRVSNKSLPSLK
KLGKTLLGLNLQHCNSISSRTFELLVETLWKCDILF
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atgcctgctcttgttaattacgttgttgatgatgatttctattctgggggttctttttat
acaaattccacagatttgggtagattgtgttcaatcagttcccaagtggatgtctactac
ccccctcgtaaaagagctcgaattactgccccgtttgttgttggagaaactttgtttgag
cagagcaagcaagcttcaatcgatgtccttcctgacgagtgccttttcgagatcttcaaa
cgacttccaggcggcagggaaaggagttcttgtgcttgtgtatcaaagcactggcttatg
cttttgatcagtattcgcaagggtgagtacgaatcctcgaaggcagtcaaggagaatact
gattcagtttctgacgaagatgatgggtatcttacgaggtgcttggaagggaagaaagca
actgacatgaggctagctgcagttgctgttggaacgactggtcatggtgggttgggaaag
ctttcaattaggggaagcagctcttcaagtggagtaaccaacttcgggctatcagccatt
gctcgtggttgcccttctctcaaggcactttctttgtggaatgtgcctcgtgttggggat
gaaggtctctctgagatagctaaagagtgccatttgttggagaagcttgacctttgccag
tgcccttcagtttcaaacaagggcttgattgcaattgcagagaactgccctaatttgacc
tctttgagcatcgagtcttgccccaaaattggtaacgaaggccttcaagctatcggaaag
ctttgccctaagttgcaggctgtctccgtcaaggactgccttcttgttggggatcatgga
gtttcaagcctgttgtcgtcaacatcttctctcctttcaaaggttaaatttcagggtttg
aatatcacagacttttctcttgctgtgattggtcactatggcaagtcggtgacaaatcta
atgcttagtggcctagaaaacgtgagcgagaagggattttgggtcatggggaatgctcaa
ggcttacaaaagttggtctctttgacgatcacatcctgccggggggtaacagatgtgagt
cttgaagccatgggaaagggatgtgcaaacctgaagcagatgtgccttcgacgatgttgc
tttatttcggatgacggattggtggcttttgccaaatctgcaggttctcttgagtcctta
cagttggaggagtgcaacaggatcacccaatccgggactattggtgtcctctcaaactgt
tcgttaaaatcccttaccgtagtaaagtgcatgggaattaaggatatatcctcggaagtt
cctttgtcgtgttgcaattcccttaaatcattgtcagtaaggaactgtccagggttcggg
actgctggcctcgctgtggcgggcagattgtgccctcagcttcagcatgtagatctgagt
gggttgtgtgggatcacggacgcaggtcttctgcctcttctggagagttgtgaggccgga
ctcgtgaaggtgaatttgagcggatgcttaaatttaaccgacgaagtagttttggcctta
accaggctgcacggtggaacccttgagttgctcaatcttgatggttgcaggaggattacg
gatgcaagtttgatggcaatagcagaaagttgtgttttcctcagtgatctggatgtctca
aggtcagcagttaccgattctggtgttgctgccttgtctcgtgccgagcaactcaactta
caagtcctttctttttcgggttgttcccgagtatcaaacaaaagcttgccttccttgaaa
aaactaggcaagacactgttggggttaaatctccagcactgcaattcaatcagcagtcga
acctttgagctgctcgtcgagaccctatggaaatgtgacatccttttctaa
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