Gossypium arboreum (tree cotton): 108470211
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Entry
108470211 CDS
T05776
Name
(RefSeq) flap endonuclease GEN-like 1
KO
K15338
holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gab03400
]
108470211
DNA repair and recombination proteins [BR:
gab03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
108470211
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
XPG_I
XPG_N
Motif
Other DBs
NCBI-GeneID:
108470211
NCBI-ProteinID:
XP_017626973
UniProt:
A0A0B0MFU4
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Position
8:complement(25078241..25081588)
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AA seq
611 aa
AA seq
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MGVGGKFWELLKSYARFEGFDFLRDKKVAIDLSFWIVQHETALKNQALNPHLRLTFFRTV
NLFSKFGVFPVFVLDGTPSPLKSQARMVRFFRFSGIDTSTSNVAEEGVSKERNSTFIKCV
NDCVELLELLGMPVLKANGEAEALCARLNRDGHVDACITADSDAFLFGATCVIKSLRPNS
KEPFECYNMSDIEAGLGLKRKHLIAVSLLVGNDHDLNGVQGIGLDKALRLVRGFSEDEIF
DKLYEIGKGHVPLFQGEIRCAGDATPCSDESSPKAKQSHCSFCGHPGSKKAHFKSCCEYC
ITDSNEGCLKKSQGFKCNCSSCDKVRKDKDKKKHENWWINVCNLISKETKFPNDEIIEMY
TCNNHGEFTEKGPLLEWGDPKTDLLVDFLAYHQSWQPSYIRQRMLPMLSTLYLRELARNP
NKTLLVGQYEFHSIQRVKIRYGHQYYEVKWKKAISNELSCAVPVEQSNMLEEEFTEVDDE
PIGLLDESIEPQIHVDGCWILTDENPELVLSAFPEEALKFRQEKELKVMKRRKISTPRSE
GSSEMSESSKPQGVQLSITEFYRTTKTPSQAKLGEDLVKQSSSPGVGSSKQKRKVSGSKL
SKAVRRRLLFG
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgggggtggggggcaaattctgggaacttctaaaatcctacgctcgattcgaaggattc
gatttcttgagagacaaaaaggtcgccattgatctctccttttggatcgttcagcacgag
actgccttaaaaaatcaagctttgaaccctcatctcaggcttactttcttccgcactgtt
aaccttttctctaagtttggagtctttccggtgtttgttttggacggaactccgtcgccg
ttgaaatctcaagcaaggatggttcggtttttccgtttctccggcattgatacttcaact
tcgaatgtggccgaagagggtgtttccaaggagaggaactcgacatttataaaatgtgtt
aatgactgtgttgagctgcttgaactattgggaatgccagtgttgaaagctaatggtgag
gctgaagcattgtgtgctcggttaaatagagatggtcatgttgatgcttgtattactgct
gacagtgatgcattcctctttggggctacttgtgttattaaaagtcttaggcctaattca
aaagaaccgtttgaatgctacaatatgtcggatattgaagctggtcttggactgaagagg
aaacacttgatagccgtctctcttttggttggaaatgaccatgacctaaatggcgtgcaa
gggatcgggcttgataaagcacttcgtttggtacgagggtttagtgaagatgagatattt
gataaattatatgaaataggcaaagggcatgtaccactatttcagggtgaaattagatgt
gctggtgatgctacaccttgttcagatgagagctcaccaaaggcaaagcagtctcattgc
tctttctgtgggcaccctggcagcaaaaaggctcattttaagtcttgttgtgaatattgt
attactgatagcaatgaaggttgcttgaaaaagtctcaagggtttaagtgcaactgctca
tcctgtgataaggttagaaaagacaaggacaagaagaaacatgagaattggtggattaat
gtttgcaacttgatttccaaggaaacaaaattcccaaatgatgagatcattgaaatgtac
acgtgcaacaatcacggagagtttactgaaaaaggccctttgctggaatggggagatcca
aaaactgacttgctagttgatttcttagcttatcatcagtcatggcagccgtcttatatt
cggcagcggatgcttccaatgctgtccaccctgtatttgagagagttggcgagaaatcca
aataagactttgttagttgggcagtatgagtttcattctattcaacgtgtgaagataaga
tatgggcatcaatattacgaggtcaagtggaagaaagccatatctaacgaacttagttgt
gcagtccctgttgaacagtccaacatgcttgaagaagaattcacagaagttgatgatgag
cccattggcctgttggatgagtcaattgagccccagattcatgttgatggatgctggatt
ttaaccgatgaaaatccagagttagttctttcagctttcccagaagaagctctcaaattt
agacaagaaaaggaactaaaagttatgaagagaagaaagatttcaacaccaagatctgaa
gggtcctccgagatgtcagaatcatcaaagccacaaggtgttcaattaagtatcaccgaa
ttttaccgtacaaccaaaacaccatcccaggcaaaactaggggaagatttagtcaaacag
tcaagtagtccaggtgttgggtcatcaaaacagaagaggaaagtttcaggttctaaattg
tccaaggctgtaagacgacgccttttgtttggttaa
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