Gossypium arboreum (tree cotton): 108470401
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Entry
108470401 CDS
T05776
Name
(RefSeq) peroxisome biogenesis protein 12
KO
K13345
peroxin-12
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
108470401
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gab04121
]
108470401
Ubiquitin system [BR:
gab04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Peripheral membrane proteins
108470401
BRITE hierarchy
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Paralog
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GFIT
Motif
Pfam:
Pex2_Pex12
zf-C3HC4_2
zf-C3HC4_3
zf-RING_UBOX
zf-C3HC4
zf-RING_2
zf-rbx1
NinF
Motif
Other DBs
NCBI-GeneID:
108470401
NCBI-ProteinID:
XP_017627180
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Position
11:115135424..115140802
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AA seq
393 aa
AA seq
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MLFQVGGQGARPTFFEMAAAQQLPASLRGALTYSIGVLALRRPFLHKVLDYEDEFFALLM
LVLETHSLRNTDASFSESLYGLRRRAAKIRTKQADIRSKSSDGIQHSSLEKRQRVLSVVF
LVVLPYLKSKLHSIYNKEREARLQASLWGPGDERFEDVDYFDEAEASIASRTSTETEATI
RTRLAKNIQKIIGVCYPWLHATTEGLTFTYQLLYLLDATGFYSVGLHALGIHVCRATGQE
LMDTSSRISKIRNRERERLPGPPWLKAVQGALLKCTYAVLDYAQTGLIAAVFIFKMMEWW
YQSAEERMSAPTVYPPPPPPPPPKVAKDGIPLPPDRTICPLCSQKRANPSVVTVSGFVFC
YACIHKYVSQYKRCPVTLMPADIDQIRRLFHDM
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgttgtttcaagtgggaggacaaggggctcgtcccaccttctttgaaatggctgctgct
cagcaactcccggctagtctccgtggagcccttacttactcaattggggtattggcattg
agaaggccgttccttcataaggtgttagattatgaagatgaattctttgctttgctgatg
ttggttcttgagactcatagtcttcgaaatacagatgcttctttttctgagtctctatat
ggtttgcggaggagagcagcaaaaataagaacaaaacaggctgatatccgatcaaagtct
agtgatgggatccaacactctagtctagaaaagcgccagagagttctttcagttgtattt
ttggttgttttgccctacctcaagtcaaaattgcattcaatttataacaaagaaagggaa
gccaggcttcaagctagtttatggggtcctggtgatgagagatttgaagatgttgactac
tttgatgaagctgaggcttctattgcttcaagaacatccacagaaactgaagctacaata
agaacacgattggcaaagaatattcagaaaattataggtgtatgttatccatggcttcat
gctaccactgaaggactaacatttacttatcaacttttatatctgctggatgctactggg
ttctattctgttggattacatgcacttgggattcatgtttgtcgagcaacgggacaagaa
ttgatggatacgtcttctagaatatccaaaattcgaaatcgtgagcgtgagaggcttcca
ggtcctccatggttgaaggcagtacaaggagctttgcttaaatgcacatatgcggtgttg
gactatgcacagaccggcttaattgctgcagtatttatctttaaaatgatggaatggtgg
tatcaatctgccgaggagagaatgtcagctccaactgtgtatcctccaccgccaccacca
ccacccccaaaggtcgccaaagatgggatccccttgccacctgatagaacaatctgtcca
ttgtgctcacagaagcgtgcaaatccatcagtagttacagtttcagggtttgtcttctgt
tatgcttgcatacacaagtatgtttctcagtataaacgttgccctgtcacgttaatgcca
gcagacattgaccagataaggcgactctttcacgacatgtga
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