KEGG   Gossypium arboreum (tree cotton): 108470443
Entry
108470443         CDS       T05776                                 
Name
(RefSeq) ubiquitin-40S ribosomal protein S27a
  KO
K02977  ubiquitin-small subunit ribosomal protein S27Ae
Organism
gab  Gossypium arboreum (tree cotton)
Pathway
gab03010  Ribosome
gab04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:gab00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    108470443
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    108470443
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:gab03011]
    108470443
   04121 Ubiquitin system [BR:gab04121]
    108470443
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:gab04147]
    108470443
Ribosome [BR:gab03011]
 Ribosomal proteins
  Eukaryotes
   Small subunit
    108470443
  Archaea
    108470443
Ubiquitin system [BR:gab04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   108470443
Exosome [BR:gab04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   108470443
  Exosomal proteins of colorectal cancer cells
   108470443
SSDB
Motif
Pfam: ubiquitin Ribosomal_S27 Rad60-SLD Ubiquitin_2 Rad60-SLD_2 Dsc3_N Plexin_RBD TBK1_ULD Fer2_3 DUF2604 UBL_UBAC1 Ubiquitin_5 OTU1_UBXL
Other DBs
NCBI-GeneID: 108470443
NCBI-ProteinID: XP_017627244
LinkDB
Position
11:11217180..11217990
AA seq 156 aa
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKKKKVKLAVLQFYKVDESGKVQRLRKE
CPNAECGAGTFMANHFDRHYCGKCGLTYVYQKAGGD
NT seq 471 nt   +upstreamnt  +downstreamnt
atgcagatcttcgtcaaaaccctgacggggaagactataaccctagaggtcgagtcttcg
gacaccattgacaatgtcaaagctaagatccaagacaaggaaggcattccacctgaccaa
caacgtcttatcttcgccggcaagcaactcgaagatggccgcaccttagccgactacaac
atccagaaggaatccactctacaccttgtcctccgtctcaggggaggtgcgaagaagaga
aagaagaagacctacaccaagcccaagaagatcaagcacaagaagaagaaggtcaagctc
gccgtcctccagttttacaaggtggatgagtccgggaaggttcagagactgagaaaagag
tgccctaatgcggaatgtggcgccgggaccttcatggctaaccattttgataggcactat
tgcggtaagtgtgggctcacttacgtttaccagaaggctggtggggattga

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