Gossypium arboreum (tree cotton): 108470640
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Entry
108470640 CDS
T05776
Name
(RefSeq) U1 small nuclear ribonucleoprotein C
KO
K11095
U1 small nuclear ribonucleoprotein C
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108470640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gab03041
]
108470640
Spliceosome [BR:
gab03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
108470640
Complex B
108470640
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-U1
CLIP1_ZNF
Ppx-GppA_III
Motif
Other DBs
NCBI-GeneID:
108470640
NCBI-ProteinID:
XP_017627492
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Position
11:complement(13211427..13213621)
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AA seq
208 aa
AA seq
DB search
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQ
AAAFHQVGAAFNQHLMAQRPRLPILPTPVMPIPRGAPLPINQPMVPGIRPPVLPRPVPGA
PGYVPVPGMPPTVAPPGATSFPGQINGLPQPPTLAAPSTVPVTATTPTSSNAAPTMATPA
LYQSNPAAPASGGFDNFNANAQPSEANQ
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atgcctcggtattactgtgattattgcgacacttatttgacccacgactctccatcagtt
agaaaacaacacaatgcagggtacaaacacaaggcaaatgttaggacgtactaccagcaa
tttgaggagcaacaaacccagagcttaatcgaccaaagaatcaaggaacatcttggccaa
gctgcagctttccatcaggttggagctgcttttaatcaacatctaatggctcagagacct
cgacttcctattcttccgactcctgttatgcctattccgaggggcgcacctttacctata
aatcaaccaatggtccctgggattaggccccctgtactgccaagaccagttccaggtgct
ccaggttatgttcctgttccaggcatgccaccaacggtagcaccacctggtgctacttcc
ttccctggtcaaataaatggccttccacaacctcctacattggctgccccatcaactgtt
cctgtaactgcaacaacacccacttcttctaatgcagcgcctaccatggcaacaccagca
ctgtatcagtccaatcctgctgccccagcgagtggagggtttgacaatttcaatgccaat
gcacagccttctgaagctaatcagtaa
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