Gossypium arboreum (tree cotton): 108470696
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Entry
108470696 CDS
T05776
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1
KO
K14485
transport inhibitor response 1
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
108470696
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gab04121
]
108470696
Ubiquitin system [BR:
gab04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
108470696
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GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
F-box-like
LRR_4
F-box
LRR_8
Motif
Other DBs
NCBI-GeneID:
108470696
NCBI-ProteinID:
XP_017627616
UniProt:
A0A0B0MPY5
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Position
11:complement(13021156..13024955)
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AA seq
585 aa
AA seq
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MQKKMAYSFPDEVLEHVFSFIQSDKDRNAVSLVCKSWYEIERWCRRKVFIGNCYAVSPRM
VIRRFPEVRSIKLKGKPHFADFNLVPDGWGGYVLPWIAEMAGAYPWLEEIRLKRMVVTDE
SLELIAKSFKNFKVLVLFSCEGFSTDGLAAIAASCKNLRELDLRESEVDDLSGHWLAHFP
ETCTSLVSLNISCLRSDEVSFSALERLVGRCPNLRSLRLNRAVTLDKIANILRRAPQLVD
FGTGYYAAELQPDVFSNLAGAFSSCKELKSLSGFWDVVPAYLPALYSICPRLTSLNLSYA
TIQSPDLIKLVSHCPRLQRLLVLDYVEDSGLEELASSCKDLQELRVFPSDPFGAEPNVSL
TEQGLVAVSLGCPKLRSVLYFCRRMSNAALVTIAQNRPNLTRFRLCIIEPKTPDYLTLEP
LDVGFGAIVEHCKDLSRLSLSGLLTDHVFEYIGTYGKKLEMLSVAFAGDSDLGLHHVLSG
CESLRKLEIRDCPFGDKALLANAAKLETMRSLWMSSCAVSFGACKLLGQKMPKLNVEVID
ETEPPDSRPESCPVDKLYIYRSVAGPRFDMPPFVWTMDEAVRILH
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagaaaatggcatattcgttcccagatgaagtgctggagcacgtcttctcgttc
atacaatcagataaagaccgaaacgcggtgtcgctggtgtgtaaatcgtggtacgaaatc
gaacgttggtgtcggaggaaggtgtttatcgggaactgttacgctgttagccctaggatg
gttatcaggcgattcccagaagttagatccattaagctgaaagggaaaccacactttgct
gacttcaatctggtgccagacggttggggcggttacgttcttccgtggatcgcggaaatg
gctggcgcctatccttggctcgaggagattcgacttaagcggatggtagttacggatgaa
agcttagagcttatcgctaagtcgtttaagaatttcaaagtgctggtgcttttttcttgt
gaagggttttcaactgatggacttgctgctattgctgctagttgcaagaatctgagagag
ctggacttgagggaaagtgaagtggatgatttgagtgggcattggcttgctcattttcct
gagacatgcacatccttagtgtcccttaacatttcttgcttaagatctgatgaagtaagt
ttctctgccttggagcgcctggttggtagatgtcctaacctgaggtctcttcggctcaac
cgtgcagtgacccttgataagattgccaacattttacgccgtgctccacagttggttgat
tttggcaccggttactatgcagctgagctacagcctgatgtcttctcaaacttggctgga
gctttttctagttgcaaggagctaaagagcttgtcagggttttgggatgtggtcccggct
tatcttccagctctttactctatctgccctagattaacatcgctgaacttgagctatgct
accatacaaagtcctgatctcatcaagcttgtaagccactgtccaaggttgcagcgtctt
ttggtacttgattatgttgaagatagtggccttgaagaacttgcttctagttgtaaggac
ctacaggagttacgtgtgttcccatctgacccatttggtgcagagccaaatgtatccttg
acggaacagggccttgttgctgtttctttgggttgtcctaagctacggtcagttctgtat
ttctgccgacggatgtctaatgcagcgttagtcaccattgcccagaatcgtccgaacttg
acccgttttcgtctatgtataattgagcctaaaacacctgattacctgacccttgagcca
ctcgatgttggttttggagccattgttgagcactgcaaggatctcagccggctttccttg
tctggtctcctcacagatcatgtgtttgaatatattgggacatatgggaaaaagctagag
atgctgtccgtggcttttgcaggagatagtgatttaggactccatcatgtgctttctggc
tgtgaaagcctccgtaaactagagattagggactgccctttcggagacaaggctcttttg
gccaatgctgcaaagctggagacaatgcgatccctttggatgtcttcttgtgccgtgagt
ttcggagcatgtaagctgctaggtcagaagatgcccaagttgaatgttgaagttatagac
gagacagaacctccagattcaagacctgaaagctgcccagttgataagctctacatatat
aggtctgtcgctgggccgaggtttgacatgcctccttttgtgtggacaatggatgaagca
gtgaggattctgcattga
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