Gossypium arboreum (tree cotton): 108470726
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Entry
108470726 CDS
T05776
Name
(RefSeq) aladin isoform X1
KO
K14320
aladin
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108470726
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gab03019
]
108470726
Messenger RNA biogenesis [BR:
gab03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
108470726
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_WDHD1_1st
ANAPC4_WD40
WD40_CDC20-Fz
WD40
Beta-prop_CAF1B_HIR1
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
Beta-prop_EML_2
WD40_Prp19
Beta-prop_RIG_2nd
eIF2A
WD40_MABP1-WDR62_1st
WDR55
Beta-prop_TEP1_2nd
Lactonase
PD40
Motif
Other DBs
NCBI-GeneID:
108470726
NCBI-ProteinID:
XP_017627653
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Position
11:134258594..134264590
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AA seq
433 aa
AA seq
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MPSFPQPGSVTICEINRDLVTADALSDSEAKDTYGKLLGMVFNPVPFQSLEDTTQPPPAS
NAAVSQPKGFGMITSSLKHIFLPNDIDLLPEVALQGVSWHQHKHILAFISGSNQVTVRDY
EDSAGKEPCILTSESQRDVKVLEWRPNGGKSLSVACKGGICIWAASYPGNAASVRSGSAS
FLGALSRGSGTRWTLVDFFRSSHGEQISALSWSPDGRYLASASYESSSFSIWDVAQGTGT
PIRRGLGGTSVIKWSPTGDYFFSGKFDGTFYLWETNTWTSEPWSSASGFVTVATWDPDGR
MVLLAFSKSSKLGSIHFASKPPSLDAHLLPVDLPEIISLTGSQGIEKIAWDASGERLAVS
YKGGDDIYKGLIAIYDTRRNPLISASLIGFIRGPGDNPKPIAFSFHDKFKQGPLLSVCWS
SGFCCTYPLLFRS
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgccttcatttccacagcctggctctgttaccatctgcgaaattaacagagatttggtt
acagccgatgccctttccgatagtgaagctaaggatacttatggaaagcttcttggaatg
gtgttcaatccagttccgtttcaatccttagaggataccacgcaacctccaccagcttca
aatgctgccgtctctcaacccaaaggatttggaatgataacttcctccctcaaacacatt
tttctacccaatgatattgatttgttaccagaagttgctctccaaggtgtgagctggcat
cagcacaaacatatactggcatttatatccggttctaatcaggttacggttcgtgattat
gaagattcagcagggaaggagccttgcattttaacaagtgagtcacaaagagatgttaaa
gttctagagtggaggccaaatggtggaaagtcactttctgtggcatgcaagggtggaatt
tgcatttgggcggcatcttatcctgggaatgcggcatcagttagatctggttctgcttca
ttcttgggggcactctctagaggttccgggactcggtggactctagtggatttttttcga
agttctcatggtgaacaaataagtgcactttcttggagtccagatggaagatatttggcc
tctgcctcgtatgaaagctcgtcattctcaatttgggatgttgctcaaggtactgggact
cccattcgacggggattaggaggaacatcagtgattaaatggtctccaactggagattac
ttcttttctggaaaatttgatggaaccttttatctttgggagacaaacacatggacttct
gaaccgtggtcttcagctagtggttttgtcactgttgcaacctgggatcctgatggtcgt
atggtcctgcttgctttctccaagtcttcaaaattgggttctatacactttgcatcaaaa
cctccatcattggatgcccacttattaccagttgatttgccagagataatatcattgaca
ggcagtcagggaatcgagaagatagcctgggatgcttctggagagcgattagcagtgtcg
tataaaggaggggatgatatttacaaaggtctcattgcaatatatgatacgaggaggaat
cccttgatttctgcatcactaattggttttatacgaggtcctggtgacaatccaaagcca
attgcattttcctttcatgacaagtttaagcaaggaccattgctttcggtgtgctggagc
agtggattttgctgtacttaccctctactatttcgatcctaa
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