Gossypium arboreum (tree cotton): 108470729
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Entry
108470729 CDS
T05776
Name
(RefSeq) uncharacterized protein LOC108470729 isoform X1
KO
K22651
E3 ubiquitin-protein ligase RNF4 [EC:
2.3.2.27
]
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gab04121
]
108470729
Enzymes [BR:
gab01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108470729
Ubiquitin system [BR:
gab04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
108470729
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_2
zf-RING_2
zf-RING_UBOX
zf-C3HC4
zf-RING_5
zf-C3HC4_3
zf-C3HC4_4
zf-rbx1
Prok-RING_4
Zn_ribbon_6
Rtf2
zf-RING_4
zf-RING_10
zf-Nse
zf-ANAPC11
TerY_C
zf-RING_11
RING_XB3-XBAT31
TRAF3_RING
zf-RING_6
Sina_RING
Zn_ribbon_RlmA
Lar_restr_allev
Motif
Other DBs
NCBI-GeneID:
108470729
NCBI-ProteinID:
XP_017627656
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Position
11:17105381..17108595
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AA seq
209 aa
AA seq
DB search
MSTLEIRGPSLRGYRRRKAVLDLNAPPSEIREQEGTSQQAGYEDQTNQSVQSGPPATIDV
EAIDDDVIESSARAFAEAQNNSRRSRGRTVVDVDSAHISALPGWSARSSNNNQNRHRRLP
PSSSIINLEISPQSIQVEEITKPQPPPKEPTFNCPICMGPLTEEMSTRCGHIFCKACIKA
AITTQAKCPTCRKRVTVKELIRVFLPSAS
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atgagcactcttgagataagggggccttctcttaggggatatcgaaggagaaaggcagtg
cttgatctgaatgctccacccagtgaaatcagggagcaggagggtacatctcaacaggct
gggtatgaggatcaaacgaatcaatctgtacagtctggtccacctgcaaccattgatgtt
gaggctattgatgatgatgtaattgaatcttctgctagagcttttgcagaggctcagaac
aattctaggaggagccgtggaaggactgtggttgatgttgattcagctcacatttctgcc
cttccaggctggtcagcgaggtcaagtaataacaatcagaataggcacagaagacttcct
ccgagctcaagcattatcaatttggaaatctcgccacagtcaattcaggttgaggaaatc
acaaagccacagccacctccaaaggaaccaaccttcaattgtccaatttgcatgggtcca
ttaacagaggagatgtcaacaagatgtgggcatattttctgcaaggcatgcattaaagct
gcaataactacacaggcaaaatgcccaacttgcaggaaaagagtcacagtgaaggaacta
attagggtcttcctgccatcggccagttga
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