Gossypium arboreum (tree cotton): 108471053
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Entry
108471053 CDS
T05776
Name
(RefSeq) chromatin assembly factor 1 subunit FAS2
KO
K10751
chromatin assembly factor 1 subunit B
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gab03036
]
108471053
Chromosome and associated proteins [BR:
gab03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
108471053
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_CAF1B_HIR1
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_EML_2
Beta-prop_TEP1_2nd
ANAPC4_WD40
EIF3I
WDR55
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_IFT122_1st
Beta-prop_WDR35_TULP_N
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_SPT8
NBCH_WD40
Beta-prop_NUP159_NUP214
Beta-prop_DCAF12
WDR90_beta-prop_4th
Beta-prop_IP5PC_F
Beta-prop_WDR35_2nd
Motif
Other DBs
NCBI-GeneID:
108471053
NCBI-ProteinID:
XP_017628112
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Position
11:86664327..86668516
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AA seq
452 aa
AA seq
DB search
MKGGTVQINWHDTKPVLTLDFHPISGLLATGGADFDIKLWVINSGQVQKKIPTASYQNSL
SYHGSAVNALRFSPSGEQLASGADGGELIIWKLHTTETGQSWKVFKSLSFHRKDVLDLQW
STDGAFLISGSVDNSCIIWDVNKGSVHQILDGHFHYVQGVAWDPLSKYVASLSSDRTCRI
YINKPKSKTKGAEKLNYICQHTIMKAEQQPIDDAKSVKNHLFHDETLPSFFRRLAWSPDG
SFLLVPAGSYKLSTSSETINTTYVFSRKDLSRPSLQLPCANKPVVAVRFCPLAFNLRGSN
PAGFFELPYRLVFAVATLNSLYIYDTESVPPIAILAGLHYAAITDIAWSYDARYLALSSQ
DGYCTLVEFEKEELGLPIPLAEPKIMNVEGTSSIVQKPDDMVIEVNDPVTADNRTVECAE
KREGKQASPSLANTPIVNKAAKRRITPMAIDP
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggagggacagttcaaataaattggcacgacaccaagcccgtcttaaccctagac
ttccaccccatctccggtcttctcgccaccggcggcgctgatttcgatatcaagctatgg
gtaattaattcaggccaagtacagaagaaaatcccaactgcttcatatcaaaatagtctt
tcttaccatggctccgctgttaatgcccttcgcttctctccctccggggaacaacttgcc
tctggggctgatgggggtgagctgatcatatggaaattgcacactacagaaactggtcaa
agttggaaagttttcaagagtttgtcatttcaccgtaaagatgttctagatttgcaatgg
tcaactgatggtgcatttctcatctctggatctgttgacaattcttgtatcatatgggac
gttaacaaaggttctgtccatcagatattagatggtcatttccattatgttcaaggtgtt
gcatgggatcccttgtccaagtatgttgcttctctcagttcagataggacttgccgaatt
tatatcaataagcctaaatcaaaaacaaagggtgctgagaagttgaactatatttgtcag
cataccatcatgaaggcagaacagcagccaatagatgatgctaagtcagtaaaaaaccat
ctttttcatgacgaaacactgccatcattcttccgtcgattagcttggtcgcctgatgga
tcatttttactagtgccagcaggttcttataaattgtcaacttcatctgaaacaataaac
accacttatgtcttttccagaaaagacctgtcaagaccttctttgcagctcccttgtgct
aacaaaccagttgttgcagtccgtttctgccctttagctttcaaccttcgaggatctaac
ccagctggttttttcgagcttccttatcgacttgtatttgctgttgcaactttgaattca
ttgtatatttacgatactgagagtgttcctccaatagcaattttggctggtcttcactat
gcagccataactgacattgcatggtcatatgatgcacgatatttagcattgtcatctcaa
gatggttactgtacattggtagaatttgagaaggaagaactgggactacccattcctcta
gcagaacctaaaataatgaacgttgagggtacgagctctattgtccagaaacctgatgac
atggtgattgaagttaatgatccagtcacggcagataacaggacggtagaatgtgcagaa
aagagagaagggaaacaggcatcgccaagtttggcaaatactcccatcgtaaataaggca
gccaagaggcgcatcactccgatggcaatcgatccatga
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