Gossypium arboreum (tree cotton): 108471690
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Entry
108471690 CDS
T05776
Name
(RefSeq) vacuolar protein sorting-associated protein 51 homolog
KO
K20296
vacuolar protein sorting-associated protein 51
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gab04131
]
108471690
Membrane trafficking [BR:
gab04131
]
Protein recycling
Others
EARP complex
108471690
Endosome - Golgi transport
Tethering complex
GARP complex
108471690
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
VPS51_Exo84_N
Sec5
Dor1
COG5_N
EXOC6_Sec15_N
COG2_N
Vps54_N
Motif
Other DBs
NCBI-GeneID:
108471690
NCBI-ProteinID:
XP_017628758
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Position
11:11707023..11714033
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AA seq
792 aa
AA seq
DB search
MVERAKMATDDIPLDDKAKRMRDLLSSFYYPYHGSSPKAHSNYENLDSINSASFNPEHYM
NLLVQKSNLEELLRKHVEMAAEIKNLDTDLQMLVYENYNKFISATDAIKWMKSNIVGMEA
NMEQLLDKIMSVQSRSDRVNTSLFEKREHIEKLHRTRNLLRKVQFIYDLPARLAKCVKSE
AYADAVKFYIGAMPIFKAYGDSSFQDCKRASEDAIIIILKNLQGKLFSDSESIQARAEAA
VLLKQLDFPVDSLQAKLLEKLEQSLGDLQLKTNEIENVLRESNDPSKQGKGFDSVPGIGH
EVSVHGFAEAIRAYRVIFPDSESQLIKLAQNLVIKHFEMTGQRVKRRISSTNFLGALRAI
WDDVLLMDGVLSEAALSNFSLEVAHATVKKYVASTFTYLLQDISDALLKVKVSPKEAAEE
HPLQAALEASKKTVLQGSMDVLLDFRQLLDEKLGLLVKLRAFIIDWVQEGFQDFFRSLDG
CFLLLSGRKNSSSQDQGFSEGALGEKVLAGLVLVLAQLSVFIEQTAIPRISEEIAASFSS
GGARGHEHGHVFISGEICQLFKLGGEKLLHHYINIRTRRVSTLLRKRFTTPNWVKHKEPR
EVHMFVDLFLQELKAVDSEVKQILPEGLLRKHQRSDSNGSTNSSRSNALLDDKMSRSNTQ
KARSQLLETHLAKLFKQKIEIFTKVEYTQESVETTIVKLCLKSLQEYVRLQTFNRSGFQQ
IQLDIHFLRTLLKENIEAEEAIDFLLDEVIVAASERCLDPIPLEPPILDKLVQVKLSKSK
EHNLVKPPDVGR
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atggtcgaacgagcaaaaatggcgaccgatgatattccattggatgacaaggccaagaga
atgagagatctattgtcaagcttctactatccatatcatggttcatctcccaaagctcat
tcaaattacgaaaacttggattccatcaattccgcatctttcaatcctgagcactacatg
aaccttctcgtacaaaagtcgaatttggaagagcttcttcggaagcatgttgaaatggca
gccgaaatcaagaaccttgatactgatttgcaaatgttggtttatgagaattacaacaag
tttattagtgccacggatgcaattaaatggatgaaaagtaatattgtaggcatggaagca
aatatggagcaacttcttgataagataatgtcagtgcaatctagaagtgatagggtcaac
acttctctttttgagaaaagagaacacattgagaagttgcaccgaacaaggaaccttctg
cgtaaagttcagttcatttatgatctacccgctagacttgcaaagtgcgtcaagtcagaa
gcatatgctgatgcagtcaaattctacattggagctatgccaatttttaaggcatatgga
gattcatctttccaggactgtaaacgagcatccgaagatgcaattattataatattaaaa
aacttgcagggaaagctattctcagattctgaatccattcaagctagagctgaagctgca
gtgcttttgaagcaattagattttccggtggatagcttacaggcaaaactccttgaaaag
ttagagcaatctcttggagaccttcaattgaaaacaaatgaaattgagaatgttctacga
gaatctaatgatccttctaaacaaggaaaaggttttgactcggttcctggtataggccat
gaggtctctgtccatggatttgcggaggctattcgtgcttatcgagtaatatttcctgat
tctgaaagtcaattaattaaacttgcacaaaacttggttatcaagcactttgaaatgact
gggcaacgtgtaaagagacgaatttcttctaccaatttccttggtgctcttcgggctata
tgggatgatgtgcttctgatggatggagtcttaagtgaggctgcgctatctaatttttct
ttggaggttgctcatgcaactgttaaaaagtatgttgccagcacatttacttaccttcta
caagacatatcagatgctctcttgaaagtaaaggttagcccaaaagaggcagcagaggaa
catcccttacaggctgctttggaggctagcaaaaaaacagtactccaaggcagcatggat
gtcttactggattttcgccaacttcttgacgaaaagttagggctgctagttaaactgaga
gctttcataattgattgggttcaagaaggatttcaggactttttcaggtctcttgatggt
tgttttctcttgctttctggaagaaagaattcatcaagtcaagatcaaggattttcagaa
ggagcacttggtgaaaaagttcttgctggtcttgtcttggtcctagctcaactttctgta
ttcattgaacaaactgccatcccaagaatttctgaggaaatagctgcctccttctctagt
ggtggtgcacgaggccacgaacatgggcatgtttttatttcgggggagatatgtcaacta
tttaagttaggtggtgaaaagcttttgcatcattacataaatataagaacgcgaagagta
tctactttgctaagaaagaggtttacaacaccaaactgggtcaagcacaaggagcctaga
gaagttcatatgtttgttgatttatttctacaagagttgaaagcagtagatagtgaggtg
aaacagattttacctgaagggctattgcgtaagcatcaacggtctgacagcaatggaagc
accaactcatcacgtagcaacgcattactagatgataaaatgagtaggtcaaatacccaa
aaagccaggagtcagttattagaaacacatctagcaaaattgtttaagcaaaaaatagaa
atttttacaaaagttgaatatacacaggagtcagttgaaacaactatagtgaaactttgc
cttaaaagtttgcaagaatatgtcagactccaaacctttaatcgaagtggtttccagcaa
attcagctggatattcatttcttaaggactcttttgaaggagaatattgaagctgaagaa
gcgattgactttttacttgacgaggtaattgttgctgcttcagagcgttgtttggaccca
attcctttagagcctccaattctggacaaacttgtacaagtaaagttatcaaaatccaag
gaacataatctagttaaacccccagatgttggtaggtga
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