Gossypium arboreum (tree cotton): 108471912
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Entry
108471912 CDS
T05776
Name
(RefSeq) polygalacturonase ADPG2
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab00040
Pentose and glucuronate interconversions
gab01100
Metabolic pathways
Module
gab_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
108471912
Enzymes [BR:
gab01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
108471912
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Gene cluster
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Motif
Pfam:
Glyco_hydro_28
Motif
Other DBs
NCBI-GeneID:
108471912
NCBI-ProteinID:
XP_017628945
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Position
11:135911440..135915747
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AA seq
470 aa
AA seq
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MAQQNIHSLVFVYFIVLILFSFFSHYNALKEDLNASCNNYNIEDEMAAGYDPGAYPSYFT
AIEGGGMKLEDPMTVVSRDDEVLGMKQRYGVALRWTETVVNVDDFGAHGDKNVDTEAFEK
AWKKACSLNGAVILQVPEGKNYILKPVKFSGPCNSNLTIQILGNIMASDDRSDYNEDSRH
WLLLQKVDNLLVEGHDGGIINGNGMIWWQNSCKINKNLPCKDAPTALTFYNSKNLVVRNL
NIRDAQQIHVSFEKCTNVEASGFKITSPKISPNTDGIHITETKNIRITSSIIGTGDDCIS
IVNGSQNMQAMDITCGPGHGISIGSLGSKNSKAYVSGVTIDGAKLYGTTNGVRIKTWQGG
SGTASNIIFQNIEMYNVSNPIIIDQNYCDQSKPCKEQSSAVQVKDVLYNNINGTSSDEIA
INFICSKNHPCQGIVLRNVNLLQEEEHRPAKAICNNVMLSEGDNVFPQCP
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atggctcaacaaaatatacattcactagtattcgtatatttcatagtactaatcttattc
tcttttttttcacattacaatgctttgaaagaggatttgaatgcttcttgcaataattat
aatattgaagatgaaatggctgccgggtatgatccgggagcatacccttcgtattttacg
gccatcgaaggcggcgggatgaagctcgaggatccaatgacggtggtgtcgagggatgat
gaagttcttggcatgaagcagagatatggtgtcgctttgaggtggactgaaactgttgtt
aatgttgatgattttggtgctcatggtgataaaaatgttgacactgaggcatttgagaag
gcatggaagaaagcttgctcattgaatggtgcagtcattcttcaagtacccgaaggaaag
aactatattctcaaacctgttaaattttcaggtccctgcaattccaatcttacaatccag
atactagggaacataatggcatcagatgacagatcagattacaatgaagatagtagacac
tggcttttgcttcaaaaggttgataatttgttggttgaaggtcatgatggtgggattatt
aatgggaatgggatgatttggtggcaaaattcatgcaaaattaacaaaaatctcccatgc
aaggatgctccaacggctcttaccttctacaatagcaaaaacttggtagttcggaacttg
aacatccgagatgcgcaacaaatacatgtttcctttgaaaaatgcaccaatgttgaagct
tctggattcaagataacctccccaaaaataagtccaaataccgatgggattcatataaca
gaaacaaaaaacattcggatcacaagctccatcattggaacaggtgatgattgtatctcc
attgtaaacggatctcaaaacatgcaagctatggacataacgtgtggtccaggtcacgga
attagcattgggagcttaggatctaaaaattcaaaggcttatgtctctggtgtgactatt
gatggagctaaactatatgggactacaaatggagttagaatcaagacatggcagggagga
tcaggaactgcaagcaacatcatatttcaaaacattgaaatgtacaacgtgagtaacccg
atcatcatagaccaaaactactgcgatcaaagcaagccatgcaaggaacagagctcagca
gttcaagtgaaagacgtgttgtacaacaacattaatgggacaagttctgatgaaattgca
ataaattttatttgcagcaaaaatcatccttgtcaagggattgtgttgcgaaatgtgaac
ttgttgcaggaagaagaacatagaccagctaaagctatttgcaacaatgtcatgttgagt
gaaggggataatgttttcccacaatgcccttaa
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