Gossypium arboreum (tree cotton): 108472117
Help
Entry
108472117 CDS
T05776
Name
(RefSeq) putative pectinesterase/pectinesterase inhibitor 28
KO
K01051
pectinesterase [EC:
3.1.1.11
]
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab00040
Pentose and glucuronate interconversions
gab01100
Metabolic pathways
Module
gab_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
108472117
Enzymes [BR:
gab01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.1 Carboxylic-ester hydrolases
3.1.1.11 pectinesterase
108472117
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectinesterase
PMEI
DUF6550
Motif
Other DBs
NCBI-GeneID:
108472117
NCBI-ProteinID:
XP_017629122
LinkDB
All DBs
Position
11:complement(121873709..121875750)
Genome browser
AA seq
588 aa
AA seq
DB search
MSDDSQRAKRITIIAVCSCLLVAMVIVVAVGVNIDDDDSNEKNDKDNKNSRAYVSKKAIE
SICRPTDFKKTCEEEIGAEAGNATDTNDLIQAAFKAAMKFVSRAAQNSTTLRNLQKDPRT
KKALDICIQLMTYSINELQKSFNKIDRLELPMLHEILADLRIWLSATITNQETCIEGFKN
TTTDAGEKMNKALNISMQLSRNGLAIVTELSKGFHELNVEGIQSRRRLLGKKEVTVIGGK
PKSDLSSIFSRRLLQVNQDTQNGVKADVVVAKDGSGGFNNIKDAINRIPLNATKPFVIYI
KEGVYEENLEFGYRMINVMLIGDGKEKTRITGHINNADGIPTFRTATVAVNGDNFFAKNI
GFENSAGAAKLQAVALMVTADFSVFYNCSMDGYQDTLYVHSKRQFYRDCTVTGTIDFVFG
DSASIFQNCTFLVRKPLDGQQNAVTAQGRSDVRQPTGIVLQNSRIMAASELVSLKNKYPT
YLGRPWGNFSRTIIMETYIDDLVKPDGWAIWDGSWGLSTCFYAEFNNDGPGSNTTSRVKW
PGIKNFSMENAVDFTPGSFFIGGDSWIRARNVPYTVGFFKNNVQQKAQ
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatgattcacagagggcgaagagaatcacaatcatcgccgtttgttcttgcctg
ttggtggcgatggtgatcgtcgtggccgtcggtgtcaacatcgacgatgacgactccaac
gaaaaaaacgacaaagataataaaaactcccgcgcatatgtttcaaagaaagcaatcgaa
tccatttgccgaccaacggatttcaagaaaacatgcgaggaggaaatcggggccgaggct
ggcaatgccactgataccaatgatcttatccaagcggcgttcaaggccgcgatgaagttc
gtgtctcgagctgcacagaactcgactaccttgagaaaccttcagaaagatccgagaacg
aagaaagcactagacatatgcatacaactaatgacttattcgataaacgaattacaaaaa
tcattcaacaaaatcgatcgattggaattaccgatgctccatgaaattttggccgattta
aggatttggctaagtgctacaatcaccaaccaagagacttgcattgaaggattcaagaat
acaacgacagacgctggagagaaaatgaataaggcattgaacatctccatgcaactaagc
cgaaatggcctcgccatcgtcaccgagttgtcaaaagggtttcatgaattaaacgttgag
ggtattcaaagccgccgacgcctactcggcaaaaaggaagttacggttatcggtgggaaa
ccgaagtccgatttgagttcgatatttagccgtcggctactccaagtaaaccaagatact
caaaacggggtgaaggctgatgttgttgtggctaaggatggtagtgggggatttaacaac
attaaagatgcaataaaccgtatacccttgaatgctacaaagccttttgttatatatata
aaggagggagtttatgaggagaatctggaatttggttataggatgatcaatgtgatgcta
atcggagatggtaaagagaaaacccgaattacaggtcacatcaacaatgctgatggtatt
cccactttcaggactgctacagttgctgtaaacggagacaatttctttgccaagaacatt
gggttcgagaactccgctggggcagccaaattacaagcagttgcattgatggtgaccgcc
gatttctccgtcttctacaactgttccatggatggttatcaagacacactttacgttcac
agcaaacgccaattctaccgcgattgcaccgttaccgggaccatcgatttcgtctttggt
gactcggcttccattttccagaactgcacattcctcgtccgaaaacctttagacggacaa
caaaacgccgtcaccgcgcaaggccgatccgacgttcgacaaccgacgggaatcgtcctc
caaaactccaggatcatggcggcctccgaactggtctcattgaagaacaagtacccaacg
tatcttggccgtccatggggcaatttctcgaggacaatcatcatggaaacttacattgac
gatttggttaaaccagatgggtgggcaatatgggatggttcgtggggtttaagcacttgc
ttctacgccgagttcaacaacgatggccctggttcgaacacgacgagtcgtgttaaatgg
cctgggattaagaacttttcaatggagaatgcagttgacttcactccagggagcttcttc
attggtggtgattcatggataagggctcgaaacgtaccgtacaccgtagggttttttaag
aacaatgtgcaacaaaaagcgcaatag
DBGET
integrated database retrieval system
