Gossypium arboreum (tree cotton): 108472403
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Entry
108472403 CDS
T05776
Name
(RefSeq) ornithine decarboxylase 1B, chloroplastic-like
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab00330
Arginine and proline metabolism
gab00480
Glutathione metabolism
gab01100
Metabolic pathways
gab01110
Biosynthesis of secondary metabolites
gab04148
Efferocytosis
Module
gab_M00134
Polyamine biosynthesis, arginine => ornithine => putrescine
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
108472403
09106 Metabolism of other amino acids
00480 Glutathione metabolism
108472403
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
108472403
Enzymes [BR:
gab01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
108472403
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Ortholog
Paralog
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
AP_endonuc_2
Motif
Other DBs
NCBI-GeneID:
108472403
NCBI-ProteinID:
XP_017629401
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All DBs
Position
11:117872357..117873912
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AA seq
432 aa
AA seq
DB search
MDVFLVISCIRNSFFNKFSSFLSNKVSKLRPMVGEAKLIANRVTKPVSRDDLFHFIKSAI
SNEQQQTDPFYVLDLDAIRSLVETWFCNLPVVQPFYAVKCNPNPAFLKEMAALGTGFDCA
SLPEIETILSLGVSPDRIVFANTCKPESHIKYAAKVGVNLTTFDSNYELEKIKKWHPKCA
LLIRIKVPETSGATFKFGSKFGALPEEIVPLLKAAQEAKLQVVGVSFHIGSRAINFHAFD
DAIEAAKTTFDTAAQLGLPKMHILDIGGGFTSGPKFTDAASAVIAALQKYFPGELADGHL
KIIAEPGRFFANSPFTLATSVIGKRERAEVKEYWISDGISGSMNFLKYDHDEVICTPLIM
KNPTCKELKTWSSTVFGPTCDAADTVLKGFELPELDVNDWLVFHNMGAYTSSRGNDFNGF
KTSAIPTIAYEN
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atggatgtcttcttggttatttcatgcattcgcaactcttttttcaataagttctcttcc
tttctttcgaacaaagtctccaagctcagaccaatggtgggtgaagcaaagttgatagca
aatagggtgacaaaacccgtatccagagatgatttatttcatttcattaaatcagccatt
tccaatgaacaacaacaaacagacccattttacgtgctggatttggatgcaatcaggtcc
ctggtggagacatggttctgtaatcttccagtagttcaacctttctatgctgtcaaatgc
aaccctaaccctgctttcctcaaagaaatggcagctctcggcaccggcttcgactgtgca
agccttcctgagattgaaaccattttgtctcttggggtttcgcctgatcgaatcgttttc
gcaaacacatgtaaacctgagtctcacatcaagtatgcagctaaagttggcgttaactta
accactttcgactccaactatgagctcgaaaagatcaaaaagtggcacccgaaatgtgca
ctgttgatccgaatcaaagtcccggaaaccagtggtgcaacattcaagttcggttccaag
ttcggtgcactccctgaggaaattgttccgcttctgaaagcagctcaagaagcaaagctc
caagtcgttggcgtctcgtttcatattgggagcagagcaattaacttccatgcattcgac
gatgccattgaagcagccaaaacaacgttcgacactgcagctcaacttgggctacctaaa
atgcatatcttagacataggtggaggcttcacatcaggtccaaagtttaccgatgcagcc
tccgccgtgatagctgctttacaaaaatatttccctggtgagctagctgatggtcactta
aaaatcattgcggaacctggtcgcttctttgctaattcgccatttacattagcaacaagc
gtaatagggaaacgagaaagggcggaggttaaggagtactggattagcgatgggatttcg
gggtcgatgaactttttgaagtacgatcacgatgaagtgatttgcactcctctcatcatg
aaaaaccctacatgcaaagaattgaaaacatggagttccactgtttttggaccgacatgc
gatgcagctgatacggttttgaagggttttgaattgccagaattggacgtgaatgattgg
ctggtctttcacaacatgggtgcttatacttcatcccgtgggaatgatttcaatgggttc
aaaacttcggccattccaactattgcctatgaaaattag
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