Gossypium arboreum (tree cotton): 108472720
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Entry
108472720 CDS
T05776
Name
(RefSeq) transcription factor MYC2
KO
K13422
transcription factor MYC2
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab04016
MAPK signaling pathway - plant
gab04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
108472720
04075 Plant hormone signal transduction
108472720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gab03000
]
108472720
Transcription factors [BR:
gab03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
108472720
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GFIT
Motif
Pfam:
bHLH-MYC_N
HLH
Herpes_UL25
RBR
bHLH_INO4
bHLH-TF_ACT-like_plant
GAF_NLP
CSN5_C
Motif
Other DBs
NCBI-GeneID:
108472720
NCBI-ProteinID:
XP_017629761
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Position
11:10195961..10197728
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AA seq
495 aa
AA seq
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MEDLIISPSSSSSLVSFSQETPSPTLQQRLQFVIQSQQDLWAYAILWQTLNDDLGRLFLA
WGDGHLQCTKDASPRLSSSFHSERTKVIKGIQALIGDQHDIDLSMIDGTDITDVEWFYMM
SMARSFSAGEGIPGKALSTGSLVWLTGAHELQFYNCERAREAQMHGLETLVCIPTSCGVL
ELGSSEIIRENWGLVQQVKSLFESDLIGLVPKQSTPPNLTPASVQFLNRNISFADIGIIA
GVQEEDGASQDIKTKQEHNNNQTKKDSSKLGQPSYVDSEHSDSDFPLLAMNNVEKRTPKK
RGRKPGLGRETPLNHVEAERQRREKLNHRFYALRAVVPNVSRMDKASLLSDAVSYINDLK
AKIDELESQLQRECKKVKVEMVDTMDNQSTTTTTTSEEEQQAARPSYSSPGTGSGIELEI
KIMVNDAMIRVHSENVNYPAARLMGALRDLEFQVRHASMSSVNDLMLQDIVVRLPDGLRT
EEGLKSALLRRLDLQ
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atggaagacctcataatctctccctcttcatcttcttctctggtttccttttcccaggaa
actccgtctccaacccttcagcagaggctgcagtttgtaattcaaagccagcaagatttg
tgggcatatgctatattatggcagacactgaacgatgacctgggtcgtctgttcttggct
tggggagatggtcatcttcaatgcactaaagatgcttctccaaggttgagttccagcttc
cacagcgaacgaactaaggtgattaaaggaatccaagccctcattggagaccaacatgac
atcgatttgtctatgatcgacggaaccgatatcactgatgtcgaatggttctatatgatg
tcaatggctcgatccttctctgctggcgaagggattcctggcaaggctcttagtactggg
tctttggtttggttaactggtgctcatgagttgcaattttacaattgtgaaagagctaga
gaagcccaaatgcatggccttgaaacactggtttgcatacccacttcttgtggtgttctt
gaactaggatcctcagagattatcagggaaaactggggtttagtccagcaagtgaaatcc
ctattcgaatccgatctcattggtctggttccaaaacaatcgactcctccaaatttaacc
ccagcttcggtccagttccttaacagaaatatctcatttgcagacatcggcataatagcg
ggtgttcaggaagaagacggtgcaagccaggatattaaaacaaagcaagagcataacaat
aaccaaaccaagaaagattcctcaaaacttgggcaaccttcttatgtggactcagagcat
tcggattctgattttccattactagccatgaataacgtggagaagcgaaccccaaagaaa
cgaggaaggaaacccgggctcggacgagagacaccgttgaatcatgtggaagcggagagg
caacgccgtgagaagctgaaccacagattctacgctctccgagcagtagtcccgaacgtg
tcgcgcatggacaaagcatcgctcttatctgacgctgtttcctacatcaatgatctaaag
gcgaaaattgatgaattagagtcgcagcttcagagagagtgtaagaaagtgaaggtagaa
atggttgatacaatggataaccaaagcaccactactactaccacatctgaggaagagcaa
caggcagccaggcccagctattcatctcctggaactgggagtggcattgaactggagatc
aagattatggtaaatgatgcaatgataagggttcactcagagaatgtgaactatccagca
gctaggctaatgggtgcccttcgtgacttggaattccaggtccgtcatgcaagcatgtcg
tctgttaacgacctcatgcttcaagacatagtggtcaggcttcctgatgggttgagaact
gaagaaggcctcaaatctgctctcctcaggaggctagatctgcagtaa
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