Gossypium arboreum (tree cotton): 108472825
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Entry
108472825 CDS
T05776
Name
(RefSeq) pleiotropic drug resistance protein 3-like isoform X1
KO
K08711
ATP-binding cassette, subfamily G (WHITE), member 2, PDR
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
108472825
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gab02000
]
108472825
Transporters [BR:
gab02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
108472825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
PDR_assoc
ABC2_membrane_7
AAA_21
RsgA_GTPase
ABC2_membrane_3
AAA_29
SMC_N
AAA_18
AAA
ABC_trans_N
AAA_16
AAA_22
Rad17
AAA_28
AAA_30
AAA_25
AAA_33
TsaE
PduV-EutP
AAA_5
nSTAND3
NACHT
AAA_17
AAA_23
AAA_14
ORC-CDC6-like
RuvB_N
RNA_helicase
Spore_III_AA
AAA_11
Viral_helicase1
NPHP3_N
AAA_19
ABC_ATPase
AAA_7
T2SSE
Motif
Other DBs
NCBI-GeneID:
108472825
NCBI-ProteinID:
XP_017629872
LinkDB
All DBs
Position
11:10760516..10769520
Genome browser
AA seq
1457 aa
AA seq
DB search
MGHELGKHDMMEELAETGRNLGSSFRHLSSSFRSTTSDLAVSSFRQNNDDEMELQWAAIQ
RLPSFKRLRTSLFDHKLLNDTTKEEEDIKVDRKRKVIDVTELGALERRVFIEKLITKIED
DNLRLLKKLKERIDRVGLEFPTLEVRFQNLSVEADCEVVQGKPIPTLWNTITSVFSALTT
VRRCKSQSYKIKVLKDISGIIKPSRMTLLLGPPGCGKTTLLRALSGKLNPSLKVTGEISY
NGYKFTEFVPQNTSAYISQYDLHISEMTVRETLDFSARCQGIGGRAGMLKEISRREKQSG
IVPEPDIDTYMKAISIEGLKGTLQTDYILKILGLDICADTIVGDAMNRGISGGEKRRLTT
GEMIIGPTKALFMDEISTGLDSSTIFQIVTCLQQLTHITEATILVSLLQPPPETFDLFDD
IILMEEGKIVYQGPRNYVQEFFEHCGFRCPERKGVADFLQEVLSEKDQAQYWYRKDQPHS
FVSVDNFTVAFKKFHTVQKLNEELCTPFHKCECHKSALSFNLYSLGKWELLKTCMAREWL
LIKRNSFVYVSKTSQLVVIALITMTIFIRTRMKLDLVHASYYLGSLFYALIRLMTTGVAE
LALTVSRLSVLYKQRDCYLYPAWAYSIPAAILKIPFSFIDAFLWTALTYYVIGYSPEPER
FFRQLFLLFLIHQMAISLFRFIASVIRDPPFAANFGLFTIMVIFLFSGFIIPQPLLPSWL
KWGFWLSPLAYSEIGIAVNEFLAPRWQQVSSSNATLGQQVLEKRGLNFSGYYYWISVAAL
IGFWIIFNIGFTFALSLLKPPGSSRAIISHERFSYLKAKEDLSDTTEENELPNADSLKAP
AETKVKGMVLPFKPISISFEDVQYFVDTPKKLREQVCPQKRLQLLQDITGAFRPGILTAL
MGVSGAGKTTLMDVLSGRKTGGYIEGEIRIGGYPKVQETYARISAYCEQTDIHSPMITVE
ESVMYSAWLRLPTEINKHQRLEFVAEVLQMIELDEIKDALVGIPHASGISPEQRKRLTIA
VELVSNPSIIFMDEPTSGLDARAAAIVMRVVKNIVNTKRTIVCTIHQPSIDIFEAFDELI
LMKRGGQMVYSGELGQHSSRLIKYFEGISGVPKIKENHNPATWMLEVTSPSVEAQLGIDF
ALIYKESHLYKRNKEIVKSQSLPAQGSEKLQFSTPFPQNGCEQLKACLWKQHLSYWRSPK
YNLARLAFTISSSSFYGALLWQKGQNLHDEQDFFNIIGSTYVFIIFTGTSNCSSVLPFIS
TQRTIVYRERFARMYSSWAYSVAQVIIEIPYIFLEAVLFLTITYPAVNFYGSAYKVFWYF
YTVFCTLLYYKYLGMMLVSLTPTYQVATIYASLFYTLLSLFSGYLMPGPKFPKWWVWGYW
ISPSSWSLKGLLTSQYGDIEEEIVAFGEKKALNAFLDSQYGYKYQDLPIIAIVLLTFPLV
FASVFAYGIAKLNYQRR
NT seq
4374 nt
NT seq
+upstream
nt +downstream
nt
atggggcatgaactagggaagcatgacatgatggaagagctggctgagacagggagaaac
ctcgggtcatcttttcgccacttatcttcaagcttcaggagtactacctcggacctcgct
gtgtcctccttcagacaaaataatgacgacgagatggagttgcagtgggctgcaattcag
agactgcccagtttcaagcgcttaagaacctcattgtttgatcacaagcttttaaatgat
actaccaaagaagaagaggatatcaaagttgacaggaagaggaaagtgatcgatgttaca
gagcttggagcattggaacgccgcgttttcatcgagaaactcattaccaaaattgaggac
gataatctccgactgttgaagaaactgaaagaaagaatagacagagtggggctggaattt
ccaactcttgaggtgagattccagaatttgtcagtggaagcagattgtgaagtagttcaa
ggaaagcccattcccacactttggaacaccatcaccagtgtattctctgctttaacaaca
gttagaagatgcaagtctcaatcgtacaagataaaagttctcaaggatatcagtggcatc
atcaagccctcgaggatgactctattgcttggccctccgggctgcggaaagaccactttg
ttacgggcgctttcagggaagcttaatccatctctcaaggtcacaggggaaatatcctac
aatggttacaagttcacagagtttgtgcctcagaatacatcagcttacataagtcaatat
gacctacacatttctgaaatgactgtaagagaaacacttgacttctcagctcgttgccag
ggcattggaggccgagcaggtatgttaaaagaaatcagtagaagggagaagcaatctggc
attgtcccggaaccagatatagacacatacatgaaggcaatctctattgaaggactaaaa
ggaactctccagacagactatatattgaagattcttggactggacatttgtgctgatact
atagtgggagatgcaatgaacagaggaatctcaggtggtgaaaagagaaggctgacaaca
ggggaaatgataattggtccaactaaagctctctttatggatgaaatatcaactggctta
gacagctccactatcttccaaatagttacctgtctacagcagctaacccacataacagag
gcaacaattctagtatcgcttcttcaaccaccaccagagacttttgatctctttgacgat
attattctaatggaagaaggaaagattgtataccagggaccacgcaattatgttcaagag
ttctttgaacattgcggttttaggtgccccgaacgcaaaggggttgctgacttcctccaa
gaagtgctttctgaaaaggaccaagcacagtactggtatcgtaaagaccaacctcatagt
tttgtttctgtggacaacttcacagttgcattcaagaagtttcacacagtccagaagcta
aatgaagaactgtgcacacctttccataaatgtgagtgtcataaaagtgccttgtcattc
aacttatattcattgggaaaatgggaattactcaaaacatgtatggcaagagagtggctt
ctcattaagagaaactcatttgtttatgtctctaaaacatcacagcttgtagttattgca
ctgataacgatgaccatctttattcgcactcggatgaagcttgaccttgtccatgcaagc
tattacctgggttccttgttttatgctctcataagacttatgacgaccggagttgctgag
ttggcattaactgtttcccgactttcagtattatataagcaaagagattgctacttatat
ccagcatgggcttattccattccagctgctattctaaagattccattttcatttatagat
gcttttttgtggacagctctaacatactatgtgattggttacagtcctgaaccggaaagg
ttcttccgccaactcttcctccttttccttattcatcaaatggcaatatcactattccgt
ttcattgcttcagttattagagatccaccttttgcagcaaattttggtctttttacaata
atggtgatatttttattcagtggcttcataattccacagcctttactaccttcttggctc
aaatggggcttttggctttcaccacttgcatattctgaaataggtatcgcagtaaatgag
tttctagcaccgaggtggcaacaggtttcatcttcaaatgccaccttaggacagcaagta
ttagaaaaacgtgggttaaacttcagtggctactattactggatatcagtagcagcattg
ataggattttggattatttttaacattggattcaccttcgctttgagccttttaaagcct
ccagggagttctcgggctattatttctcatgaaagattttcttacctaaaggcaaaagag
gatttgagtgatacaactgaggaaaatgaactgcctaatgccgactctctaaaagctcca
gctgaaacaaaagttaagggtatggttttaccatttaagcccatatcgatatcgttcgag
gatgtgcaatactttgttgatactcctaagaaactgagagagcaagtgtgtccacaaaaa
agactacagctacttcaagatattaccggtgcatttagaccaggaattctcacagcttta
atgggtgttagtggagctgggaaaacaacactaatggatgtcctttcaggaagaaaaact
ggcggttatattgaaggagagataagaattggagggtaccccaaagtccaagaaacatat
gctagaatatcagcttactgtgaacaaactgacatccattctccaatgattacagtagag
gaatcagtgatgtactcagcttggttgcgtctaccaactgagattaataagcatcaaaga
ttggaatttgtagcagaggttcttcaaatgattgagttggatgaaatcaaagatgcttta
gttggcatcccgcatgcaagtggaatatcaccagagcagcgtaaacggctaaccatagca
gtagaacttgtttctaatccatccataatatttatggatgagccaacttcgggtttagat
gccagagcagctgcaattgtcatgcgagttgtgaagaatattgttaacacaaagaggaca
attgtatgcaccatccatcagccaagtattgacatattcgaagcatttgatgagcttatt
ttgatgaaaagaggaggacaaatggtatattccggagaactgggtcagcattctagtagg
cttatcaaatactttgagggtatatctggagtaccaaaaattaaagaaaaccataaccca
gcaacatggatgttagaagtcactagtccttctgtggaggctcaacttggaatagacttt
gcccttatctacaaagaatcccatctctacaagagaaacaaagaaatagttaaaagccaa
agccttccagcacagggttcggagaaactacagttttctacaccctttccgcaaaatgga
tgcgagcaattaaaagcatgcctctggaaacaacacttgtcctattggagaagtcccaaa
tacaacttggcacgcttggcttttacaatttcatcttcttcgttttatggagccttactc
tggcagaaaggacagaacctacatgatgagcaggactttttcaacataatcggatcaaca
tatgttttcatcatattcactggaacaagtaattgttcatctgttcttccattcatatct
actcagcgtacaatagtctaccgtgaaaggtttgccagaatgtactcttcatgggcatat
tcagttgcacaggtgattattgagattccttatatctttcttgaagcagtattattcctg
acaatcacttatccagctgtaaacttctatggatccgcttacaaagtattttggtacttc
tacaccgtattttgtacgctgctctattacaaatatttaggcatgatgttggtttctttg
actccaacttaccaagtagctacaatatatgcaagcctcttttacactttgttaagctta
ttctcggggtacctcatgccaggaccgaaatttcctaaatggtgggtttggggctactgg
atttccccaagttcgtggtccctgaaaggtctcctcacttcacaatatggagatatagag
gaagaaattgtagcatttggagagaaaaaagcactcaacgcctttttggacagtcagtat
ggctataaatatcaagatttacccataatcgccattgtacttcttacttttccacttgtc
tttgcatctgtttttgcatatggtatagctaaactaaactatcaaaggagataa
DBGET
integrated database retrieval system
