Gossypium arboreum (tree cotton): 108472918
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Entry
108472918 CDS
T05776
Name
(RefSeq) E3 ubiquitin-protein ligase hel2-like
KO
K22381
E3 ubiquitin-protein ligase ZNF598 [EC:
2.3.2.27
]
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gab04121
]
108472918
Enzymes [BR:
gab01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108472918
Ubiquitin system [BR:
gab04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
108472918
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_13
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
108472918
NCBI-ProteinID:
XP_017629973
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All DBs
Position
11:complement(11211629..11214725)
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AA seq
553 aa
AA seq
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MDDSCVVCADNLEWVAYGACGHRDVCSTCVARLRFICNDLRCCICKTESNVIFVTKALGD
YTRMINDFSVLPTEVREGRVGSYWYHEDTQAFFDDVAHYRMIKAMCRLSCIVCDKIEEQS
NAGIKRRGKFRNIEQLKGHLFHQHRLVMCSLCLEGRKVFICEQKLYTRAQLNQHINTGDS
EVDGTESERGGFRGHPMCEFCKSPFYGDTELYSHMSTEHYTCHICQRQHPGQYEYHKNYN
DLEIHFRRDHYLCEDETCLAKKFIVFQSEAELKRHNTIEHGGRMSHAQRSAALQIPTSSR
YRRRNDDTRRGRERTSRYEPSDNDHRLSMAIEASLETASDPPASSFTQADSDCGDINDIY
PLVQPFELLSATVCESSSGYLQALGGGSRGAPLQGTSFPPLSTPASSSQQTPKHSSDGLP
INTMAAHLRRQKNASTNVLSSAQEWPKTRHRLLQAASRSSQVAPTTNVAAATALGNNNGF
PQLSSASSTHAHIQVQFQPTTADILKASGSPMSGGSTSRINHSSSARNLADGGFSGPSLF
DFLPVSAAQRHKV
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atggatgatagctgcgtggtttgtgctgacaatttggaatgggttgcctacggcgcgtgt
ggtcaccgagacgtgtgctccacgtgtgttgctcgtctccgcttcatctgcaacgatctt
cgttgctgcatctgcaagactgagtccaacgtcatctttgtcactaaggctctaggggat
tacacgaggatgatcaatgatttctctgtattgccaactgaagtaagggaaggccgggtg
ggttcatactggtaccatgaggatacacaagcattttttgatgatgttgctcactacagg
atgatcaaggcaatgtgtaggctttcttgcattgtatgtgacaaaatagaagagcaatcc
aatgctgggatcaagcggaggggaaaatttaggaacattgaacagttaaaaggccatttg
tttcatcagcacagattggttatgtgcagcctgtgtttggaaggtcggaaggtatttatc
tgtgaacaaaagctatatactagggcacagttaaatcaacatataaacacaggtgactca
gaggtggatggaactgagagtgagagaggtggcttccgggggcatcccatgtgtgaattc
tgcaagtctccattttatggtgatacagagttatactcacacatgtccacagagcactat
acatgtcatatctgccaaagacagcatcctggacaatatgaatatcacaagaactataac
gaccttgagattcattttcgccgagatcattacctatgtgaggatgagacatgccttgcc
aaaaaatttattgtctttcagtctgaagctgaactaaagaggcataataccattgaacat
ggaggtcgcatgtctcatgcacagcgcagtgctgctttacaaataccaacaagctctcga
tatcgtcgaagaaatgatgatactcgtcgtggaagggagagaacatctcggtatgagcca
tctgataatgaccatcgactttcaatggccattgaggcaagtttggagacggccagtgat
ccaccagcatcatcttttacacaggcggactctgattgtggagacataaatgatatttat
ccacttgtccagccttttgaattgttatctgctacagtttgtgaatcatcttctggatac
cttcaagcattagggggaggttctaggggtgcacctttgcaaggaacatcttttcctcct
ctctccacgcctgccagttccagtcaacaaacacctaaacatagctcagatggcttgcct
attaacactatggcagcgcatctaaggcgccagaagaatgcgagtacaaatgttttgagt
tcagcccaagaatggccaaaaacaagacacaggcttctacaagcagcaagcagatcaagt
caggttgcaccaacaacaaatgttgcagctgcaacggcacttggaaataataatgggttt
ccgcagttaagctctgcaagttcaactcatgcacatattcaggttcagtttcagcccact
acagcagatatattaaaagcatctggttctccaatgagtggaggcagcacaagtaggatt
aaccactcttcatcagctcgaaatcttgctgatggcggattttctggaccttcccttttt
gattttcttccagtttctgcagcacaaaggcataaggtgtaa
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