Gossypium arboreum (tree cotton): 108473078
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Entry
108473078 CDS
T05776
Name
(RefSeq) probable pectate lyase P59
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab00040
Pentose and glucuronate interconversions
gab01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
108473078
Enzymes [BR:
gab01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
108473078
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GFIT
Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Beta_helix
Motif
Other DBs
NCBI-GeneID:
108473078
NCBI-ProteinID:
XP_017630126
UniProt:
A0ABR0N5Z0
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Position
11:107947865..107949733
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AA seq
438 aa
AA seq
DB search
MAAHSYSLFLFSLSFVVLIPTLQAHIAEYDDYWKARKLEAIENLNKAYHPNPEEIVHHYN
DQFAKTMIKLNNTRRVLKGTKENGPCEITNPVDSCWRCDPNWEKNRKRLADCAPGFARGT
TGGKEGEFYVVTDPSDDILNPKPGTLRHAVIQRRPLWITFKRSMIITLEQELIITSNKTI
DARGANVQIAKGAGITVQFVKNVIIHGLHIHHIITGTGGTIRDAEDHFGLRTASDGDGIS
VFGATNIWLDHLSVTNCSDGLIDVIEGSTAVTISNCHFTDHNEVLLFGASDSYTGDQKMQ
ITVALNHFGKGLVERMPRCRHGFIHVVNNDYTHWLMYAIGGSRNPTIISQGNRYTASSTL
ASREVTKRVYAPPEVWKKWNWISEGDHFENGAFFVSSGDPTASKKYGIDKMMPFNPGEMA
PKLTQYAGTLNCKPGKPC
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atggctgctcatagttatagcttgtttcttttttccttgtcttttgttgtcttaatccca
acccttcaagctcacattgctgaatatgacgattattggaaggcacggaaattggaagcc
attgagaacctgaacaaggcttatcaccccaatcctgaggagatagtccaccattacaat
gaccaatttgccaaaaccatgattaagcttaataacaccagaagggtgttgaagggaacg
aaagaaaatggtccatgtgaaataaccaaccccgttgatagctgctggcggtgtgatcct
aactgggaaaaaaacaggaagaggctggccgattgtgcccctggatttgctcgtggtact
accggtggaaaggagggtgagttttacgtggtcactgacccttctgatgatattcttaac
cccaaacctggaactctgcgtcatgctgtcatccaaagaagaccactttggatcactttc
aaaagatccatgatcatcaccctggaacaggagctcattattacaagcaacaagaccatt
gatgctaggggcgccaatgtgcagattgctaagggtgctggtattacggtccagtttgtc
aagaatgtcattatccatggcctccatatccatcacattattaccggcactggtggcacc
atcagggatgctgaagaccacttcgggttaaggactgccagcgacggagatgggatctct
gtattcggagcaaccaatatttggctcgaccatctttcagttaccaattgctccgatggt
cttatcgatgttattgagggttccactgccgttaccatttccaactgccatttcactgac
cacaatgaggtgttgttgtttggagcaagcgattcttacactggggaccagaagatgcag
ataaccgttgctttgaaccacttcggtaaaggattggtagagaggatgcctaggtgccga
cacggttttatccatgtcgtcaacaacgactacactcactggctcatgtatgctattggc
ggcagccgcaaccctacaattatcagccagggcaacaggtataccgcgtcatccaccctc
gcgtctagggaggtgaccaaaagggtgtacgcaccacccgaagtgtggaagaaatggaac
tggatatcagagggtgaccatttcgagaacggtgccttttttgtttcatccggtgatccc
acagccagcaagaaatatggtattgacaaaatgatgcctttcaatcccggtgagatggcc
cccaaactcacccagtatgccggaacactcaactgcaaaccgggcaagccttgctaa
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