Gossypium arboreum (tree cotton): 108473247
Help
Entry
108473247 CDS
T05776
Name
(RefSeq) ABC transporter G family member 29-like
KO
K08711
ATP-binding cassette, subfamily G (WHITE), member 2, PDR
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
108473247
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gab02000
]
108473247
Transporters [BR:
gab02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
108473247
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
PDR_assoc
ABC2_membrane_7
AAA_21
ABC_trans_N
AAA_29
AAA_25
AAA_16
AAA_28
AAA
AAA_33
RsgA_GTPase
nSTAND3
ABC2_membrane_3
ABC_ATPase
Motif
Other DBs
NCBI-GeneID:
108473247
NCBI-ProteinID:
XP_052876005
LinkDB
All DBs
Position
10:complement(8102513..8110535)
Genome browser
AA seq
1439 aa
AA seq
DB search
MDGIEKARSPRSSSSHNNLSSGIRLSLSKNHWTMDDVFAARNTGAEEDDEEALKWAAIEK
LPTYDRLRTSIMNSFVENDDGNTNKFGPREVDVRKLDMDDRQRFINALLKVTEEDNEKFL
RRFRNRLDKVGIRLPKVEVRYEHLNIEAETYLGSRALPTLVNSAQNIAELALAMLGIRLS
KPTKLNILKDISGIIKPSRMTLLLGPPSSGKTTLLLALAGKLDPSLKVSGEVSYNGYKLN
EFVPQKTSAYISQHDVHVPEMTVQETLDFSARCQGVGTRYDLLSELARREKYAGIYPEPE
VDLFMKATAIEGAENSLVTDYILKMLGLDICKDTIVGDQMIRGISGGQKKRVTTGEMIVG
PTKTLFMDEISTGLDSSTTYQVVKCLQQIAHLTDATIFMSLLQPAPETFDLFDDIVLISE
GRIVYQGPREHVVEFFESCGFKCPERKGVADFLQEVTSKKDQEQYWADGSKPYSYVPVTE
FANRFKKFHVGVQLANELSMPFDKSRGHRAALVFSRYSVTKLELLKACWDKEVLLMKRNS
FFYIFKTTQIIIIAFFASTVFLRTRLHHRDEEDALLYNGALLYSLITNMFNGYPEISLMI
TRLPVFFKQRDHLLYPAWAFAIPLLVTKIPLAIFETIAWMTLTYYPIGFAPGADRFFKKM
LVVFMIQQMSASLFRLISGVCRTIVVSNTGGMFALMFVAFLGGFTLPRTQIPKWWKWGYW
LSPLTYGYTSVSVNEMYAPRWIKRRASDNVTELGVAMLEELEIYRNKNWYWIGVGALLGF
CILFNVLFTLSLTYLNPPAGPQAVLPQDTGDETDSQSNPTRATTKKGMVLPFTPLAMSFD
KVNYYVDMPAEMKAQGLAENRLQLLREATGAFRPGILTALMGVSGAGKTTLMDVLAGRKT
GGYIEGDVRISGFPKRQETFARVSGYCEQTDIHSPQITVRESLIFSAFLRLPKEINNKEK
MTFVDQVMKLVELDDLKDGLVGLPGVTGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLD
ARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYFGRLGRNSQK
IIEYFEAVPGIPKIKEKQNPATWMLEVSSAAVEAQLGIDFAEHYKSSSLYQQNQALVKAL
STPPPGANDLHFITQYSQPMWGQFRCCLWKQFKAYWRTPEYNLVRLGFTLIAALIIGSIF
WGAGTKMKNATQLSVITGGMYVAAMFLGVNNCQTAQPVVAIERSIFYRERAAGMYSALPY
ALAQVIVEIPFVVTQSSYFTLIVYAMMKFNWMAKKFFWFFFVNFCTFLYFTYYGMMAVAI
SPNVQVAAILAAAFYALFNLFSGFYIPKPRIPPWWIWYYWICPMAWTVYGLITSQYGDDE
RTIEVQGMKLDPTIKWYLEHHFGFHHDFLWAVAVVLVVFPLFFAFMFGLCIKLLNFQVR
NT seq
4320 nt
NT seq
+upstream
nt +downstream
nt
atggatggtatagagaaagcaagaagtccaaggagtagttcaagccataataacctgagt
agtggtataaggctcagcttgagcaagaaccattggacaatggatgatgtttttgcagcg
cgaaacactggagctgaggaagacgatgaagaagctctgaaatgggctgctatagagaag
ttgccaacttatgatcggttaagaacaagtatcatgaattcttttgtggagaatgatgat
ggaaacaccaacaagtttggtccaagagaagttgacgtgagaaagctggacatggatgac
cgacagagattcattaacgcactgcttaaggttactgaagaagacaacgagaagttcttg
aggaggtttagaaacagacttgataaggtggggattcgacttcctaaagtggaagttagg
tatgagcatttgaacattgaagcagaaacctatctgggtagcagagctcttccaactctt
gtaaattcggctcaaaatattgctgaattagctcttgccatgcttggtattaggttgtcc
aagccaaccaaacttaatatccttaaggatatctctggtattatcaaaccatccaggatg
acccttttgctaggcccaccatcctctggaaaaacaacccttttgcttgcattggctgga
aaattggatccaagcttaaaggttagtggggaagtaagctacaatgggtacaaactcaat
gaatttgttccccaaaagacctctgcatatatcagccaacatgatgttcatgttccagaa
atgacagttcaagaaaccttagatttctctgcaaggtgccaaggggttggaactcgatat
gaccttttaagtgaacttgctaggagggaaaagtacgcaggcatttaccctgaaccagaa
gttgaccttttcatgaaggcaactgcaattgaaggagctgaaaacagtcttgtcactgac
tacattctcaaaatgttgggcctcgatatatgcaaggatacaatagttggagatcagatg
attagaggcatatctggaggacagaaaaaacgagtaacaacaggagagatgatcgttggg
ccaaccaaaacattgttcatggatgagatatcaaccggccttgatagttccacgacatat
caagttgtcaagtgcttgcagcagattgctcatctaacagatgccactatctttatgtcc
ttactacagccagctcctgagacgtttgatctctttgatgatatagtgctcatctctgaa
ggtcggattgtttatcaaggtccacgggagcatgtcgttgaattcttcgagagctgtggg
ttcaaatgtcctgagaggaagggggttgcagatttcttgcaagaggttacttcaaaaaag
gatcaagaacagtattgggcagatggaagtaaaccatacagttatgttccagttactgag
tttgcaaataggtttaagaagttccatgttggagtgcagctagcaaacgagctctcgatg
ccttttgataagtccaggggccacagagcagccttagtcttctcaagatattcagtaaca
aaacttgaacttcttaaggcctgctgggataaagaagtgttactgatgaagagaaactca
ttcttttatatcttcaagacaactcagattattattatagcattcttcgcatcgacagtg
tttctcaggactagattgcatcatagggatgaagaagatgcattgctctacaacggtgct
cttctctattcacttatcaccaacatgttcaatggttatcctgagatttcacttatgatc
actaggcttccagtttttttcaagcaaagagaccacttactctatccggcatgggcattc
gccatcccattactcgtgacaaagatacctttagccatttttgagacaattgcttggatg
acactgacatactaccccataggatttgcaccaggggctgacaggtttttcaagaaaatg
cttgtggtatttatgatccaacaaatgtctgcttcattatttaggctcatctcaggggtc
tgcaggaccatagttgtttcaaacactggcggaatgtttgctctgatgtttgtggcattt
ctgggaggtttcacccttcctagaactcaaatacctaaatggtggaaatggggttactgg
ctttcacctttgacatatggttacacttctgtttctgttaatgaaatgtatgctccaagg
tggattaaaagacgggcttctgacaacgtaaccgaattgggggtggcaatgcttgaagaa
ttagaaatatatcgtaataaaaattggtattggattggtgtaggagctcttctggggttc
tgtatccttttcaatgtcctatttaccctgtcactcacttatctgaaccctccggcaggc
ccacaagcagtacttccacaagatacaggcgatgagacagacagtcaatcaaatccaaca
cgagcaacaaccaagaaaggaatggttcttccattcactcctttagcaatgtcatttgac
aaagtgaactactatgttgacatgcctgcagaaatgaaggcacaaggcttagcagagaac
aggttgcaattacttcgagaagcaacaggtgcatttaggcctggaattttgaccgcttta
atgggagttagtggagctgggaagactacgttgatggatgttttggctggaagaaaaact
ggtggatacattgaaggtgatgttagaatatcaggattccccaaaaggcaagaaactttc
gccagagtctctggatattgtgaacaaactgatatacactcaccccaaatcacggtcagg
gaatccctgatattttcggctttccttagacttcctaaagaaattaacaataaagaaaaa
atgacttttgtggatcaagtgatgaaactggtagagttagacgatctgaaagatggccta
gtagggctgcctggagttacagggctgtcaacagagcagagaaaaagattgacaattgca
gtagagcttgttgctaatccttcaattattttcatggacgaacctacatctgggcttgat
gcaagggcggctgctatcgtcatgagaactgtgagaaacactgtggatactggtagaact
gttgtctgcacaattcatcaacctagcatcgatatatttgaagcctttgatgaattgtta
ttgatgaaacgtgggggacaagtaatctactttggacgattgggtcgaaattcccaaaag
attattgaatattttgaggcagttcctggtattcccaaaattaaggagaaacaaaatcca
gcaacttggatgctagaagtgagctcagcagcagttgaagcacaacttggaattgacttt
gcggagcattataagtcatcgtctttgtatcagcaaaaccaagctttagtaaaagcgcta
agcacaccacctcctggagctaacgacctacatttcatcactcaatattctcagcctatg
tgggggcagttcagatgttgcctctggaagcaattcaaagcttactggagaacccctgaa
tataaccttgtcagattaggtttcactttgattgcagctctaatcatcggatcaattttc
tggggagctggaacaaaaatgaaaaatgcaactcagctttctgtgataacgggaggcatg
tatgtagctgccatgtttctcggagttaataactgccaaacagcccaaccggttgtagcc
attgaaagaagcatattttatcgagaaagagcagccggaatgtactctgcattaccttat
gcacttgcgcaggtaatagtagaaataccatttgttgtaacccaatcttcatattttaca
cttattgtgtatgctatgatgaagttcaactggatggcgaaaaagttcttctggttcttt
tttgttaacttctgcaccttcctttacttcacatactacgggatgatggctgttgccatc
tctccaaatgttcaagtagctgccatcttagctgctgctttctatgcactctttaatctt
ttctccggcttctacattccaaaaccaagaatccctccatggtggatatggtattattgg
atctgcccaatggcatggacagtatatggattgatcacgtcgcagtatggagatgacgag
cgcactatagaagtacaagggatgaagcttgaccctactattaaatggtacttagaacac
catttcgggtttcaccatgatttcctgtgggcagttgctgtggttttggttgttttccca
ttgttctttgcattcatgtttgggttatgcatcaagttgctgaacttccaagttcgatag
DBGET
integrated database retrieval system
