Gossypium arboreum (tree cotton): 108473369
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Entry
108473369 CDS
T05776
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 23 isoform X1
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
gab01002
]
108473369
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gab04121
]
108473369
Enzymes [BR:
gab01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
108473369
Peptidases and inhibitors [BR:
gab01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
108473369
Ubiquitin system [BR:
gab04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
108473369
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
108473369
NCBI-ProteinID:
XP_017630370
UniProt:
A0A0B0N5I3
A0ABR0PTL0
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All DBs
Position
5:3533520..3539179
Genome browser
AA seq
939 aa
AA seq
DB search
MEATVISCSELRIEAETEECSDLGNFSSASGSTSVGLSKRRIVFHPARKPLNGFNGCADE
DFKIETLNPGTDPKRVNGVRPAQVGATGWKVDASDIWENGLDPVLSLRTTFRKIGAGLEN
LGNTCFLNSVLQCLTYTEPLVAYLQSGKHQNSCHIAGFCALCAIQKHVSRALKSTGRILA
PNDLVSNLRCISRNFRNSRQEDAHEYMVNLLESMHKCCLPSGVPSESPRAYEKSLVHKIF
GGRLRSQVKCLQCSYCSNTFDPFLDLSLEIVKADSLLKALKNFTTAELLDGGERQYQCQR
CKQKVRAIKQLTVYNAPHVLTIHLKRFQAHNLGQKIERKVEFGPTIDMKPFVSGSNEGYL
KYTLYGVLVHRGWSTHSGHYYCFVRTSSGMWYTLDDNRVFQVSEKTVLEQKAYMLFYVRD
RRNTAPKNSVDILQRDNVKASVDGKSIFNQNPGEHVQTGPIQNKLSAAVPQKDIINGGLS
KETIMKEVPSQQNNVQLMEEGLVLKKEAILPSFNVPLLKDSSKASVSNLIHGENLQPSAG
SVVGNVASSNIENPTVSTGAKDSNESGNCKREFGVPVMVPPNCGGLLKSCTDKIVAKETL
QKINLASNIKVSNTVTLDDSIDKAVKQAPSEASKNVHAIRSPNKPHCDSNKIGDVSYHSS
RDKSLNEKGDDNSQKTISRSPSSMPNGSLETEDPEYAPCRKSKKKHLKRKPNNMPLGLKS
KFFIASLLMHGKKKRKRSKEKDCCSLDLGPSTCEKFSTITLGSVHGRKRTADDSTQKNGD
NSASSLMNTVDVASKERICENGTVLATDQHVGSSSGSVSEANRHNSRETDSLKHSKTGAS
AHRHVLTQCIGEAVVPRWDDIGLTSPMQTAESNGIDGLEIGYVPDEWDEEYDRGKRKKIR
QNKHQFGGPNPFQQIATKKTQLKKAKLDRSSSGNRPFRI
NT seq
2820 nt
NT seq
+upstream
nt +downstream
nt
atggaagcaacggtaattagttgctcggaattgagaatcgaagctgagactgaggagtgt
tcggatcttgggaacttttcatcggcttcaggttctactagtgttggcctgtctaagaga
aggatcgtattccatccagcgaggaagccccttaatgggtttaatggttgtgcggatgag
gattttaaaatcgagactctaaaccctgggacggatccgaagcgggtaaatggggtgcgg
ccggctcaagtgggtgctacaggatggaaggttgacgcatctgatatttgggagaacggg
ttggatccagttctcagtttgaggactacttttcgcaaaattggtgctggtttggagaat
cttgggaacacttgttttcttaattcagtattgcaatgcctgacgtacacagagccttta
gtagcttacctacaaagtggcaagcatcaaaattcttgccacattgctggattttgtgcc
ttatgtgctattcagaaacatgttagccgtgctctaaaatcaactgggaggatattggcg
ccaaatgatcttgtctcaaacctgcgatgcatatctagaaacttccgaaattctagacag
gaagatgcacatgagtacatggtaaacctgctggaatcgatgcacaagtgctgcttacct
tcaggagtaccaagtgaatctcctagggcttatgagaagagtttggtgcacaagatcttt
ggtggtcgccttcgtagtcaggtgaaatgcttgcaatgttcttactgctccaacacattt
gatcccttccttgatttaagtcttgaaatagttaaggcagattccttgcttaaagcactt
aaaaacttcactactgcggagctcttagatggaggggagaggcaatatcaatgccagcgc
tgcaagcagaaagttagggctatcaaacagctcacagtttacaatgcaccgcatgtactt
acaatccatctaaagagatttcaagcacataatttggggcaaaagattgagaggaaagtt
gaatttggtcctaccatagacatgaagccttttgtcagtggttccaatgaaggatatttg
aagtacactctttatggcgttctggttcatcgtggatggagcacacattctggccactat
tactgttttgtccgcacatcaagtggcatgtggtacacccttgatgacaacagggttttc
caggtcagtgagaagactgttttggagcagaaggcttacatgttgttttacgtccgtgac
agaagaaatacggctccaaaaaattctgttgatattcttcagagagataatgtaaaagca
agtgtggatgggaagtctatttttaatcagaatcctggggaacatgtgcaaactggtcca
attcagaacaagttatctgctgctgtgcctcagaaggatatcattaatggtggcttatca
aaggagacaatcatgaaggaagtgccatctcagcaaaacaatgtgcaactaatggaagaa
gggttagtgctgaaaaaggaggccattttgccctctttcaatgtgccattattgaaggac
tcatcaaaagcatctgtttcaaacctgattcatggtgaaaacttgcaaccatcagcaggt
tctgtggttggcaatgttgcgagttctaatattgaaaacccaactgttagtactggtgcc
aaagatagtaatgagagtggaaactgcaaaagggaatttggagtcccagtgatggtacca
ccgaattgtggtggtcttctgaagtcatgcactgataagattgtagctaaagagacattg
cagaagattaatcttgcttcaaacattaaggtttcaaacactgtcacattggatgattca
atagataaagcagtgaagcaagctcctagtgaagcatctaagaatgttcatgcgattagg
tctccaaataagccacattgtgacagtaataagattggcgatgtttcctaccacagtagt
agggataagtcattgaatgagaaaggtgatgataatagccaaaaaaccatttccagatca
ccttcgagcatgccaaatggatcactggagactgaagatcctgaatatgcaccctgtaga
aaatcaaagaagaagcatctgaagcgtaagcctaacaatatgcctcttggcttaaaatca
aaatttttcatagcttctctactcatgcatggcaagaagaaacgtaaaaggagcaaggaa
aaggattgttgttcattggacctggggccatctacatgtgagaagttcagcacaatcaca
ttaggttcggttcatgggaggaaaaggacagctgatgatagtactcagaaaaatggtgac
aatagtgccagttccttgatgaataccgtagatgtagcatctaaagagaggatttgtgag
aatggtactgttcttgctactgatcaacatgtaggcagcagttctggctcagtctcagaa
gcaaaccggcataactcaagagaaactgattctttgaaacatagcaaaacaggtgcatcg
gctcataggcacgtgcttacccaatgtataggggaggcagttgttcctagatgggatgat
ataggcttaacctcacccatgcagactgcagaatcaaatggtatagatggtcttgaaatt
ggatatgtaccggatgaatgggatgaggagtatgaccgtggtaagaggaagaagataaga
caaaataagcatcagtttggtggtccaaatcctttccaacaaattgctaccaagaaaaca
cagttaaagaaggccaaattggaccgttctagctctggaaaccgaccattcaggatatga
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