Gossypium arboreum (tree cotton): 108473386
Help
Entry
108473386 CDS
T05776
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 16-like isoform X1
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
gab01002
]
108473386
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gab04121
]
108473386
Enzymes [BR:
gab01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
108473386
Peptidases and inhibitors [BR:
gab01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
108473386
Ubiquitin system [BR:
gab04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
108473386
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
zf-MYND
Motif
Other DBs
NCBI-GeneID:
108473386
NCBI-ProteinID:
XP_052881788
LinkDB
All DBs
Position
3:119427265..119435137
Genome browser
AA seq
1071 aa
AA seq
DB search
MLFIWDLGFPSLVLVLSLLLPLIGFFVRRKWQFSVARQAEIKRLLILASEEAARVELEAT
IEYGTVSISRNYHQCAVCYCPTTTRCARCKGVRYCSAKCQIIHWRQGHKEECHPPAIAIH
QNHDEGSDYGQKAINQDQYGDRYEIEEKSHAKLIGTSSTESALFSSITGPALLSSSSSSV
VLDGKDDDAKVEFHADREGLSSAPESSSASFSGFSSAAGSESSDDVSVCESVSSNELDKL
DGSSSADVNLDTFWTSVVNNVDQTNPSSPKFVSLVDSVDEISKLSHSKPDQSEESQCRAT
SSSGLGVSDMSEGSNAEASRFSSDFWGRTLESVPSTSVDDNESFNSYHKEGSKMASLDSG
SSLHFSFTLAGNASSSYPQVSKVKDAKLDDATQCATTLGHSKLSDGVVLSENGGLDSPNE
GNSKSSNSVCTNQGECGSNNIQHVINPREAINIDFPLVGSLSSSHFEKSGSTVVTNGPSI
SNASHLSESSDSYSSSDRVHAVPSVKSGKFDDVHANFAKLSQFSSYSSNGKNGLKTSMWK
VVDQFRVSKFPKHHSFGVSNEGIFPYESFVKLYSWNKVELQPRGLVNCGNSCYANAVLQC
LTFTPPLTAYFLHGIHSKACAKKDWCFTCEFEKLILKAKDGKSPLSPIGILSQLQNIGSQ
LANGKEEDAHEFLRYAIDAMQSICLKEAGLASSGCLEEETTLIGLTFGGYLRSKIKCMKC
QGKSERHEKMMDLTVEIEGDIGTLEEALRRFTRTEILDGENKYQCSRCKSYEKAKKKLTI
LEAPNILTIALKRFQSGKFGKLNKAIRFPEILDLAPYMSGTSDKSPIYRLYGVVVHLDIM
NAAFSGHYLCYVKNAQNKWFKIDDSMVTSTELERVLTKGAYMLLYARCSPRAPRLMKSRN
KAIPSSVNSKNPLKSNSWTYSGLDEFHPSLIHSDTPSSIESFYSKYNQLQRILEDSSSSD
SCSLFSVNSDEGSCCTDSTRDSTSTDDLIDSIFGDSVQGWNSPWRSCDSDASFSSSSSPL
YLRHSPVADLDRYSSGSPEIRSSRMDEEGKGDDPFFHSDTMSKQCRKVVVA
NT seq
3216 nt
NT seq
+upstream
nt +downstream
nt
atgctttttatttgggatttagggtttccgagcctggtgctcgtgctctccctgctcctt
cctttgatcggctttttcgtaaggcggaaatggcagttttctgtagcaaggcaagcggag
ataaagaggctcttgattttggcctctgaggaggcggctagagtcgagcttgaagcgact
attgaatacggtacggtttctatttcgcggaactatcaccagtgtgctgtttgttattgt
cctactaccacgcggtgcgctcgctgtaaaggggttcgatattgttctgcgaagtgtcaa
attattcactggcggcaaggtcacaaggaagaatgccacccacctgccattgccatacac
caaaatcatgatgaagggagcgattatggtcagaaggcgataaatcaagaccaatatgga
gatagatatgagattgaagaaaagtcacatgcaaagttaattggaacatcctctactgaa
tctgcattgtttagttccatcacaggacctgcattattgagttcctctagctcttctgtg
gttttagatgggaaggatgatgatgcaaaggttgagtttcatgctgatagggaaggactg
agctctgctccagaatcttccagtgcttcattttcaggattttcgtctgcagctggtagt
gaatcatctgatgatgtttctgtgtgtgagagcgtaagttcaaatgagcttgataaattg
gatggttcctcatctgctgatgttaatcttgacacgttttggacttctgttgtcaacaat
gtggatcaaaccaatccatcatcccctaaatttgtcagtttggttgattctgtggatgaa
atttctaaattaagtcatagcaagcctgatcaaagtgaagagagccagtgcagagcaact
agttcttcaggattaggtgttagtgatatgtctgagggctcaaatgctgaggcttctaga
ttttcttctgatttttggggcagaactttggaatcagttccatctacaagtgttgatgac
aatgagtcatttaactcttatcataaagaaggcagtaaaatggcctcacttgattctgga
tcatccttacatttttcatttactttggctggaaatgcttcttcctcatatccgcaagtc
tccaaggtgaaagatgccaaattggatgatgctactcaatgtgctactactttggggcat
tccaagctttcagatggagtagttttgtccgaaaatggtggtttagattctccgaatgaa
ggaaactccaagtcctcaaattctgtatgcaccaaccagggtgaatgtggatctaacaat
attcagcatgttataaatcccagagaagctatcaatatagattttccactagtcggtagc
ttgtcatcttcccattttgaaaaatcaggctctactgttgtcactaatggacctagcatt
agcaatgcttctcatttgtcagagtcatctgattcttattcatccagtgacagagtgcat
gctgttcccagtgtgaaatctggaaaatttgatgatgttcatgcaaatttcgctaaatta
tctcagttttcaagttattcttctaacggtaagaatggattgaaaacctcaatgtggaaa
gttgttgatcaattcagagtatctaaatttccaaaacaccattcatttggagttagtaat
gagggaatttttccttatgaatcatttgtcaagctttatagttggaacaaggtggaatta
caaccacgtggccttgtaaattgtggtaacagctgttatgccaatgctgtccttcaatgc
ttgactttcactcctcctctgactgcttactttcttcatggaatccattccaaagcatgt
gcaaagaaagattggtgtttcacttgtgagttcgaaaaattaattttgaaggctaaagat
gggaaatctccgctgtcccctataggaatactttcccaactacaaaatattggcagtcaa
cttgctaatgggaaagaggaagatgcacatgaatttttaaggtatgctattgatgctatg
caatctatttgtcttaaagaagctgggttggcttcatcaggttgtttagaagaagaaaca
actttaataggcttaacatttggaggctaccttcggtcaaagataaagtgcatgaagtgc
caaggcaagtccgaacgtcatgaaaaaatgatggacctaacagttgaaattgaaggagac
ataggaaccctagaagaggctcttcggcggtttactaggactgaaattctggatggagaa
aacaagtaccaatgtagcagatgcaaatcttatgagaaggccaaaaagaagttgacaata
ttagaggctccaaatattcttacaattgctttgaagagatttcagtctggtaaatttgga
aagcttaacaaagcgattcggttccctgagattttggacttggcaccatatatgagtggg
acaagtgataaatcacccatttacaggctctatggagtagtggtccatttggatatcatg
aatgcagcattttcgggtcactacttgtgctatgttaaaaatgctcaaaacaagtggttt
aagattgatgacagcatggtaacatctacagaactcgaaagagttctaacaaaaggagca
tatatgcttctttatgccaggtgctcacctcgggccccgagattgatgaagagcagaaat
aaagccattccatcgagtgtcaattcaaagaatccgctgaagtcaaattcttggacatat
tctggtcttgatgaattccaccccagcttgattcattcagatactcctagcagtattgaa
tctttttattcaaaatacaatcagctgcaaaggattttagaggactcgtcgtcaagtgat
agttgttctctttttagcgtcaattctgatgaaggttcctgctgtactgatagcacacgt
gattctaccagcactgatgacttaatagattctatatttggtgattcagtccaagggtgg
aacagcccatggaggagttgtgattcagatgcttctttttcatcatcttcttcccccctt
tacttgaggcattcacctgttgctgatttagaccgatatagttcgggttcacccgaaatt
cgcagctctcgaatggatgaggaaggtaagggagatgatccttttttccactccgacacg
atgagtaaacaatgtagaaaggtagtagtagcttag
DBGET
integrated database retrieval system
