Gossypium arboreum (tree cotton): 108473462
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Entry
108473462 CDS
T05776
Name
(RefSeq) septin and tuftelin-interacting protein 1 homolog 1
KO
K13103
tuftelin-interacting protein 11
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gab03041
]
108473462
Spliceosome [BR:
gab03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
108473462
Other components
Complex C specific factors
108473462
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Paralog
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
DUF8146
Motif
Other DBs
NCBI-GeneID:
108473462
NCBI-ProteinID:
XP_017630517
UniProt:
A0A0B0MSE4
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Position
11:91380286..91383872
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AA seq
853 aa
AA seq
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MDEYQEMERFGMENDFEDAQWIDGEFYYKKRKEKRTQTKDDVIYGVFASDTDSEDGGSSS
SRKRRKEFGKKADLTKPVNFVSTGTVMPTQEIDNNSKVENDNSVPDDNGNDSRPGLGSGV
GLGFGGNDSLPKSDGNVVADEDGDSSFLPTAFGRKIKEGAQRREKERERLKMEKKSLGGR
REAGGGNGDVGSFEKHTKGIGMKLLEKMGYKGGGLGKNEQGIVAPIEAKMRPKNMGMGFN
DFKEAKLPGLQQLEEKKSVSQQPVGKAKERLWSKNAKGRKKEEYITVEELLAKKQEEGVE
IVQKVIDMRGPQVRVLTNLENLDAEEKARENDVPMPELQHNLKLIVDLAELDIQKIDRDL
RNEKETALSLQKEKEKLEIEASHQKQHLANMEQIVSVLGQIEEENSSGKLTLESLANSFR
DLQKNYADDYKLCNLSCIACSLALPLFIRMFQGWDPLLNPSYRMEVISAWKDLLQIDGSY
DIWEDAATPYCQLISEVVLPAVRISGINTWEPRNPEPMLGFLESWEKLLPSPILQIILDT
VVMPKLSRAVDSWNPRKETVPIHVWVHPWLPMLGPKLEGLYQTIRMKLSNVLDAWHPSDP
SAYAILSPWKTVFDSMSWEQLMRQYIVPKLQIALQEFQINPADQKLDQFYWVMSWASAIP
IHLMVDLMEKFFFVKWLQVLYHWLCSKPDFEEIKNWYMGWKGLLPQELLANESIRNQLNC
GLEMMVQAADHVPVVQPGLRENVTYLKVREQRQFEAQQRAAAHAQQPAAAQMDGVPEMSL
KEVVETYAQQHELLFKPKPGRMHNGQQIYGFGNISVIVDSLNQKIFAQKDNGWSLVSLDD
LLKMHYNSLARRR
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
atggatgaatatcaagagatggaaaggtttgggatggagaacgattttgaagacgcacaa
tggatagacggcgaattctactacaaaaaacgcaaagaaaaacggactcagacaaaagat
gatgttatttatggtgtttttgcatctgataccgactctgaagacggtggttcttcttca
tcaaggaagagaaggaaagaattcgggaagaaagccgacttgacgaagcctgttaacttt
gtttctacaggtactgtaatgcctacccaagaaattgataataattctaaggtagagaac
gataatagtgttccggatgataatgggaatgatagcaggcctggattggggtctggcgta
ggtttagggtttggtggaaatgatagcttgcccaaaagtgatggcaatgttgttgctgat
gaggatggtgatagtagttttttgcctactgcctttgggaggaagataaaggaaggggca
caaaggagagagaaagagagggagaggttgaaaatggagaagaaaagcttaggaggcaga
agggaggctggaggtggtaatggtgatgttgggtctttcgagaagcatactaagggtatt
gggatgaagttgcttgagaaaatggggtataaaggaggtggtcttgggaagaatgagcaa
ggaattgttgcacctattgaggcgaagatgaggcctaagaatatggggatggggtttaat
gattttaaggaggctaagttgccagggctgcagcagttggaagagaagaaaagtgttagt
cagcagcctgttgggaaagcaaaggagaggctttggtcaaagaatgcaaaggggaggaag
aaggaggagtatattacagtggaagagttgttagcaaagaagcaagaagagggtgttgag
attgttcagaaggtgattgatatgagggggccacaagttagagttttaaccaacttggag
aatttagatgctgaagagaaggcaagagagaatgatgttccgatgcccgagttgcagcat
aatttgaagttaattgttgacttggcagagcttgatattcagaagattgatagggattta
aggaatgaaaaagagacagcattgagcttgcaaaaggagaaggaaaagttggagattgag
gcttcacatcagaagcaacatttggctaatatggagcaaattgttagtgtgcttggccag
attgaggaagagaactcatctgggaaattgaccttggagtcccttgcaaatagttttagg
gatttgcagaaaaattatgctgatgattacaaattgtgtaacttgtcctgcattgcatgt
tcattagctttgcctctgtttataagaatgtttcagggttgggatcctcttctgaatcca
tcttacaggatggaggtgatatcagcatggaaggatttattgcaaatagatggtagttat
gacatttgggaggatgcagcaacaccttattgtcagttgatctcggaagttgttttacca
gctgtgaggatatctggcataaacacatgggagcctaggaaccctgaaccaatgcttgga
tttttggaatcatgggaaaagttacttccgtcacctattcttcagatcattttggatact
gtggtaatgccgaaattgtcaagagcagttgactcatggaatccccgtaaggaaactgtt
ccaatccatgtctgggttcatccatggttgccaatgttggggccaaagttggagggcttg
tatcaaacaatacgtatgaagttgagtaatgttcttgatgcttggcacccaagtgatcca
tctgcttatgctatactatcaccttggaagactgtttttgattcaatgagttgggaacaa
cttatgcgccaatatatagtcccgaagttgcagattgctctgcaggagttccaaataaac
cctgcagatcagaagcttgatcagttttattgggttatgtcttgggcctctgcaattccc
attcatctcatggttgatttgatggagaaatttttctttgtaaagtggctgcaggttttg
tatcattggttgtgttcaaaacccgactttgaggagataaaaaattggtacatgggttgg
aagggacttctgccacaggagcttttggctaatgaaagcatccgcaatcaacttaactgt
ggtcttgagatgatggttcaggctgctgaccatgtaccagtagtgcagcctggtttgagg
gagaatgttacatatcttaaggtgcgtgagcagaggcagtttgaggctcagcagagagca
gccgcacatgcacaacagccagctgcagcccagatggatggtgttcctgagatgagtttg
aaggaggtagttgagacctatgcacagcagcatgagttactattcaagcccaagcctgga
aggatgcataatggtcaacagatatatggctttggtaacataagtgtaatagttgattca
cttaaccagaaaatttttgcccaaaaggataatggctggtccctggtctcacttgatgat
ttgttgaaaatgcactataattctcttgcgaggagacgttga
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