Gossypium arboreum (tree cotton): 108473476
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Entry
108473476 CDS
T05776
Name
(RefSeq) uncharacterized protein LOC108473476
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gab03016
]
108473476
Enzymes [BR:
gab01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
108473476
Transfer RNA biogenesis [BR:
gab03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
108473476
Prokaryotic type
108473476
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
PUS7L_N
Motif
Other DBs
NCBI-GeneID:
108473476
NCBI-ProteinID:
XP_052878126
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All DBs
Position
11:complement(117835918..117842550)
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AA seq
733 aa
AA seq
DB search
MWRCGVSILKPNCYFHCKRNYLSLSKSNLTKHPITKYSNYSSLTMTTITESDVGILCFIS
NLPGFRGILKQRYSDFIVNEVDIEGNVVHLTSLDAPPEAFQEVETKISDQLNKNYASEIE
KFRSLACEIDVDRLEAFINQITSGSEEDISPIVLSPDSDKSHRTAMHNFFKENLRFLVTD
TVDGPDSSSKCIRVRLNSGNKNKGRNLNKRKRGDRPYDSRGSSHWPAHLGNFLRFHLFKE
NKDTQEALGLIGKMLGIQPRSFGFAGTKDKRSVSTQRVTVFKQYASRLAALNDRLIGIKV
GDFCYVKDDLLLGQLLGNRFTIVLRGVVADSEDTIQASAESLGRHGFINYFGLQRFGSGS
VPTHHIGATLLRGEWKAAASTILDPREGERNIISKAREYYKQTGDIDGTLKQLPRHLVAE
RAMLQCLKKSPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASVRVKKYGSREVVLGDLV
YSKGDDAEKTEVLPPEHEDNSLEDAYDCGQLDEISGKDLPLEKNNLVKVITASDISTGNY
TIEDVVLPMPGSRIIYPMNEVAEVYHDMAKKDGISLTESVHNIKEFSITSMTGSYRRVFQ
KPIDFQWDLLSYTDGNLALSETDIDKIAKTKPVNPVKEENPTNGTEGEESSNHLEQLESF
EDEKKFSTDDNEVEVSREAEPPQVHSPPDLNSQEPQKALKLAFTLPASCYATMAIRELLK
TSTSVAFHKTLNQ
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgtggcgttgtggtgtctcaattctaaaacccaactgttacttccactgcaaacggaac
tacttgtcactttcaaaatcaaacttgacaaaacacccaatcacgaaatactcaaattat
tcaagtttaacaatgacgaccatcaccgaatccgatgtgggaatcctatgtttcatctca
aaccttcctggttttcgtggcatcctcaaacaaagatattctgatttcattgtgaatgaa
gtagacattgagggaaatgttgttcatttgacctctttagatgcccctccagaggctttt
caggaagttgaaacaaaaatatctgatcaacttaacaaaaattatgcatctgaaattgaa
aaattcagatcacttgcctgcgaaattgatgtcgatcggttagaagctttcattaaccaa
attacttcaggcagtgaagaagatatctctcccattgttctgtctccagattctgataaa
tctcatcgaacggcaatgcataatttctttaaggaaaatcttagatttctagtcaccgac
actgttgatggacctgattcttcctcaaaatgcatccgggtgaggttaaattctgggaat
aagaacaagggaagaaatttgaataaaaggaagagaggtgataggccctatgatagtaga
ggttcaagccactggccagcacatcttggcaattttcttaggttccatcttttcaaggag
aataaagatacacaggaagccttaggattaataggaaagatgcttggcattcagccaagg
tcttttggttttgcgggtacaaaagataagaggtcagtttccactcaaagggtaactgtt
ttcaagcagtatgcaagtagattagctgcccttaatgacaggttgattggtattaaggtg
ggagacttctgctacgtcaaggatgacctcctccttgggcagcttttaggaaaccgattc
accatcgtattgcgaggagttgttgcagattctgaagatactattcaagcatctgcagag
tccttggggaggcatggcttcatcaactattttggcttacaacgttttggaagtggttct
gttccaactcaccacattggtgccacattactgcgaggcgaatggaaagctgctgcaagc
actattcttgatccaagagaaggggaaagaaatatcataagcaaggcaagggaatattat
aaacaaactggtgacatagatggtactctcaagcaattacctcgccatttagttgcagaa
agggctatgctgcaatgtttgaagaaaagtcctgggaattacttgcaagccctgaaagct
atacctaggacgttgagaatgatgtatgtccatagttaccaaagctatctgtggaaccat
gcagcaagtgtgagagtgaaaaaatatggaagccgtgaagttgtgttgggagacttggta
tatagcaaaggagatgatgcggaaaaaacagaagttttaccgcctgaacatgaagataat
agcttagaagatgcttatgattgtggtcaattagatgaaatatctggaaaagatcttccg
ctagagaaaaataatcttgttaaggtcataactgcatcagatatcagtactggaaattat
actattgaggatgttgtccttcctatgccaggctctagaataatttatccaatgaatgag
gttgctgaagtttatcatgacatggcaaagaaggatggcatcagcttgacagagagtgtc
cataatatcaaggaattttcaataaccagcatgactggaagctacaggcgtgtttttcag
aagccaatagattttcaatgggatttgctttcgtatacagatggaaatttagcattgtcg
gagacagatatagacaaaattgccaaaactaaacctgtgaacccagtcaaagaagagaat
ccaaccaatggaactgaaggcgaagagtcatccaatcatctggaacaattagagagcttt
gaggatgagaaaaagttttcaaccgatgataatgaggtggaggtttctagagaagccgag
cctccacaagttcattctccacctgacttgaattctcaggaacctcagaaagctctcaaa
ttggccttcacacttcctgcttcttgttatgccacaatggccatacgagagcttctcaag
acatccacttctgttgcattccacaagacacttaaccaataa
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