Gossypium arboreum (tree cotton): 108473531
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Entry
108473531 CDS
T05776
Name
(RefSeq) sister-chromatid cohesion protein 3
KO
K06671
cohesin complex subunit SA-1/2
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gab03036
]
108473531
Chromosome and associated proteins [BR:
gab03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
108473531
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_SCC3-SA
SCD
STAG
PDS5
HEAT
DUF2207_C
HEAT_2
Cnd1
AT_hook
CARD
DUF507
Motif
Other DBs
NCBI-GeneID:
108473531
NCBI-ProteinID:
XP_017630644
LinkDB
All DBs
Position
11:13249762..13258071
Genome browser
AA seq
1122 aa
AA seq
DB search
MDDDAPLASEITTRHSKRARVHALDGGDEPSKANGNDRENQERSSDGSDRSPNPGEREGS
PDDFEEIRPKTKRPRPAEGTSDVPNRSEERLIEVIKGNGKHISQAVKQWVERYEKNPKPA
MVELLMMLFEACGAKYYIREEYLDETDVDDVVVALVNLARKGEIEDYQGSKKKEFKNFKE
NLVSFWDTLVIECQNGPLFDKDLFDKCMDYIIALSCTPPRVYRLIASLMGLQLVTSFISV
AKRLAVQRDTTQRQLNAERKKRVDGPRVESLNNRLSATHEQKLVIDEMMRKIFTGLFVHR
YRDVDPNIRMSCIQSLGVWILSYPTLFLQDLYLKYLGWTLNDKSAGVRKAAVLALQNLYE
VEDNVPTLSLFTERFSNRMIELADDVDVSVAVCAIGLVKQLLRHQLIPDDDLGPLYDLLI
DDPPEIRRAIGELVYDHLIAQKFNSSQPGPKGNESEIHLGRMLQILREFSTDPILSKYVI
DDVWEYMKAMKDWKCIISMLLDENPLIELTDEDATNLTRLLFASVRKAVGERIVPASDNR
KQYFSKAQKEAIENNRRDLTIAMMKNYPLLLRKFMADKAKISSLVEIIVYMNLELYSLKR
QEQNFRTTLLLIKDAFFKHGEKDALRSCVKAIKFCSTESRGELQDFARNKLKELEDELLD
KLKSATKEVIDGEDEYSLLVNLKRLYELQLSRPISIDELYGDSITILHSFRNLDDEVVSF
LLLNMYLDVAWSLHSIINSETVSEGSLSSLLSKRDTLLEELEYFLNAPPEVGEGSKSGNQ
LACRVCTILADVWCLFRKTNFSSTKLERLGYCPDVSILQKFWTLCEKQLKISDDTEDDDV
NKEYIEETNRDTVMIAAAKLIASDTIPKDYLAPEIISHFVMHGAGIAEIVKSLITVLRKK
DDNVSEIFLEALKRAYHRHLELSRSDDEFIKSESFQECKNLAARLAGIFVGAARNKHRPE
ILKIVKEGIEYAFEDTPRHLSFLEASVLHFASRLPAPDIRDILKDVQKRTENVNAEEDPS
GWRPYNTFYESLLEKCAKNEGIQDEKEWTTTRQRGRPRKRQNIEGRRLFDEHGSSDEEDS
INTLDQEDAQVEGDEEDDNAPLIHSLKSASKLRSLRVSRQEN
NT seq
3369 nt
NT seq
+upstream
nt +downstream
nt
atggatgacgacgcgcctctagcctccgaaataaccactcgccattcgaagagggctagg
gttcatgctctagacggtggagatgagcccagcaaggcaaacggtaatgatagggagaat
caagaaaggagcagcgacggcagtgataggagtcccaacccaggggaaagggagggttca
ccagatgattttgaagaaattcgtcccaaaactaagcgacctcgacctgctgaggggact
tctgatgtccccaacagatctgaagagagattaattgaggttatcaaaggtaatggtaaa
catatttctcaagctgtcaagcagtgggtggagcgatacgagaagaatccgaaacctgct
atggttgaactcttaatgatgctttttgaggcatgcggggcaaagtattacatcagggaa
gagtatctggatgagactgatgttgatgatgttgtggttgctcttgtcaaccttgctaga
aaaggggaaattgaagattatcagggttcaaaaaagaaggaattcaagaatttcaaggag
aatcttgtttcattctgggacactttggttattgagtgccagaatgggcctttgtttgat
aaagatttgtttgacaagtgtatggattatataattgcactgtcgtgcacaccaccaaga
gtttatcgtctaattgcttccctgatgggtctccagctagtcacatctttcatttctgtt
gcaaagaggcttgctgtacagcgtgatactactcaaagacagttaaatgctgaaaggaag
aaaagagttgacggacctcgtgtggagtcactaaataacaggttatcagcaactcatgag
cagaaacttgtaatagatgagatgatgcgcaaaatcttcactgggttgtttgtgcatcga
tatagagatgttgatcctaatattcgaatgtcatgcatacagtcgctgggtgtttggatt
ttgtcatatcctacattgttcttgcaggatctatacttgaagtatcttggatggactcta
aatgacaaaagtgctggagtaagaaaagctgctgtccttgcattacaaaatctctatgag
gtggaggataatgtgcccactcttagtctttttactgaaaggttttctaaccggatgatt
gagcttgctgatgatgttgatgtttctgtggctgtatgtgccatagggcttgtaaaacaa
ttacttaggcatcagcttatacctgatgatgatttgggtcctttgtatgatctactcatt
gatgatccaccagaaatcaggcgtgcaataggagaattagtatatgaccacttaattgca
caaaaatttaatagttcccaacctggcccaaaaggcaatgagagtgagattcatcttgga
agaatgttgcagatattacgggagttttcaacggatcccattttaagtaaatatgttatc
gatgatgtctgggagtacatgaaggccatgaaggattggaagtgtatcatctccatgctt
ttggatgagaatccattaatagagctaacagatgaagacgcaacaaacctgactaggctt
ctttttgcttctgtcagaaaggctgttggagagaggattgttcctgcttctgataaccgg
aaacaatatttcagtaaagctcaaaaagaagcaattgaaaacaatcggcgggatttaact
attgccatgatgaagaactacccattacttctacgtaaattcatggctgacaaggcaaaa
atttcatcattggttgagattattgtatatatgaaccttgagctttattctctgaagaga
caggagcagaatttcagaactactcttctgctcatcaaagatgcatttttcaagcatggt
gagaaggatgcattgagatcttgtgtaaaggctattaaattctgttccactgagagtaga
ggagagctgcaagattttgctcgtaacaaactaaaggagcttgaggatgagcttcttgat
aagcttaaatctgcaactaaagaagtgatagatggagaggatgagtattctcttcttgtg
aatttaaaaagattgtacgagcttcaattgtcaaggcctatatcaattgatgaactctat
ggggatagtatcacaatcttgcacagcttcagaaatttggatgatgaagttgttagtttt
ctgctgctgaatatgtacttggatgtagcctggtctttgcactctattataaacagtgaa
actgtctctgaaggatccttatcgtctctcctgtctaaacgtgataccttgttggaggaa
cttgagtattttcttaatgctcctcctgaagtcggggaagggagcaaatcaggaaatcag
ctagcctgcagggtttgtactatattagcagatgtctggtgtctgtttaggaagacaaat
ttttcgtcgacaaagcttgaaagattaggatattgtcctgatgtttctatacttcagaag
ttctggaccctttgtgagaagcagctgaaaatttcagatgacacagaagatgatgatgtt
aacaaagagtatatagaggagacaaatagagatacagtcatgattgctgctgcaaagttg
attgctagtgatacaatcccaaaggattatcttgctcctgagataatttctcattttgtg
atgcatggagctggcattgcagagattgttaagagcctgattacagttctgaggaagaaa
gatgataatgtctctgaaatctttctagaagctttgaaaagggcctatcatcgacatctg
gaactttcaagaagtgatgatgaattcataaaaagtgagtcttttcaggagtgtaagaac
ttggctgctcggcttgctggaatatttgttggtgctgctcggaacaaacacagacctgag
attttaaagattgttaaggaaggcattgagtatgcttttgaagacactccaagacacctg
tcttttctggaagcttctgtgctacattttgcgtcaagacttcctgcacctgacatacga
gacattctgaaagatgtccagaagaggacagagaatgtaaatgcagaagaggatccaagt
gggtggcgcccttataatacattttacgagagtttgctggaaaagtgtgcaaagaatgaa
gggatccaagatgagaaggaatggacaactacaagacaaaggggtcgtcctaggaagcgg
caaaatattgaggggaggagactttttgatgagcatggttcaagtgatgaagaggattca
attaacacattagaccaggaagatgctcaggttgagggagatgaggaagatgataatgct
cctctgattcattcacttaagtccgcttctaagttgaggtcattacgagtctcaagacag
gaaaactga
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