Gossypium arboreum (tree cotton): 108473544
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Entry
108473544 CDS
T05776
Name
(RefSeq) uncharacterized protein LOC108473544 isoform X1
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gab03021
]
108473544
Transcription machinery [BR:
gab03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
108473544
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
BRF1
ORC6_2nd
HD_4
BRF2-like_C_cyclin_rpt
DUF3887
DmmA-like_C
Zn_ribbon_19
Motif
Other DBs
NCBI-GeneID:
108473544
NCBI-ProteinID:
XP_017630674
LinkDB
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Position
11:complement(22769641..22779287)
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AA seq
602 aa
AA seq
DB search
MVYCNNCSRNVTGERVDDGLLSCTFCGKVLEDCIFATEPQFVKDSSGQCKLSGNFVKSTQ
SISDSRQHTIAKALDGIRSLKTGLLIDEYSDDVANVALRFYEVGLERNFTKGRRSELVQA
ACLYLACRQKGKPFLLIDFSHYLHVNVYELGSVYLQLCYVLYLADSKDLPKLIDPSIFIH
KFTNALIPEGNDEVVKTARDILASMKRDWMQTGRKPSGLCGAALYISALSHGLKFSKSKI
IEVVHICEATLSKRLIEFENTDSGALTMEEFTEKERELRTSSLTEKQPNIGSKETSLDAV
LCRHVGRKPFAYGLCNECYEEFMKVSGGIDGGSDPPAFQRAEKERMAKLSIEENNKSIAS
STFASGSEIPEISGVLEDATNKAAIDEGDNDKLPGVDESDDGSDNFSDIDDIEVDGYLHN
EEEKHFKKIIWEEMNREYVEEQAAKEAAAAAAKEACMANYDKCPEDLQAAQKLAADVAEL
VAKSRKERQQKRAAEEKDAGPAQTAAEATRRMLVKKRLSSKINYDALEKLFDDPVTEKPK
KQKIESNSDEKEEKASKIGKECDLEDEYNDNDDDGYGGIFYGDCEYDNQEYDYEDNYDYD
GC
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atggtttactgtaataattgctccagaaacgttactggagaacgcgtcgacgacggtctt
ttgtcttgcactttttgcgggaaggtgttggaagattgcatttttgcgaccgaacctcaa
ttcgttaaagattcatctggccaatgcaaactatctggaaattttgtgaaatctacgcaa
agtatttcagattcacgccagcataccatagctaaagctcttgatggtatcagatctttg
aagactggattacttattgacgagtatagtgatgatgttgctaatgttgctttacggttt
tatgaagttggccttgaacggaatttcactaagggacgcagatcagagctagtacaggct
gcatgtctttatcttgcctgtcggcaaaagggaaagccattccttcttattgatttttca
cattatttacatgtaaatgtttatgagcttggctctgtatatctgcaactttgctatgtg
ctgtaccttgctgactcaaaggatcttccgaaactaattgatccttcaatttttattcat
aaatttacaaatgctttgattccagaaggaaatgatgaagttgttaaaactgcacgggac
attttagctagcatgaaacgggactggatgcagacagggcggaaacccagtggattatgt
ggtgcagcactgtacatttctgcactttcacatggtctgaagttttctaagtcaaagatt
atagaggttgttcacatttgtgaagcaacattgtcaaagcggctgattgaatttgagaat
accgactctggagccttaacgatggaggaatttacggaaaaggagagggagcttcgaact
agttcattaactgaaaaacagccaaatattgggtcaaaagaaaccagcttagatgcagtg
ctatgtaggcatgtggggagaaaaccttttgcctatggactttgtaatgaatgttatgaa
gagttcatgaaggtttcaggagggattgatggagggtcagatccacctgcattccaacgt
gctgagaaagagagaatggcaaaattatctattgaggaaaataataaaagcatagccagc
agcacgtttgcaagtggatctgaaatacctgaaattagtggggttttagaggatgcaact
aacaaggcggccattgatgagggtgacaatgataagttacctggagttgatgaaagtgat
gatggatcggataacttttctgatattgatgatattgaggttgatggttaccttcacaat
gaggaggagaagcatttcaaaaagatcatttgggaagaaatgaaccgggaatatgttgag
gaacaagcagccaaggaagcagctgcagcagcagctaaggaggcttgcatggccaactat
gataaatgcccagaggacctccaagctgcacagaagcttgctgcagatgttgcagaacta
gtggcaaaatctagaaaggagaggcaacaaaagcgagctgctgaagaaaaagatgcaggt
cctgctcagactgctgccgaggcaacccggcgaatgctggttaagaagagattaagttca
aaaataaactatgatgcattggagaagctctttgatgacccggttacagagaaacccaag
aaacaaaaaatagaatcaaattctgatgaaaaggaggagaaggcttctaaaattggcaaa
gaatgtgatttagaagatgaatataacgacaatgatgatgatggatatggaggaattttt
tacggtgactgtgaatatgacaaccaagaatatgattatgaggataattatgattacgat
ggatgttga
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