Gossypium arboreum (tree cotton): 108473645
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Entry
108473645 CDS
T05776
Name
(RefSeq) vacuolar protein-sorting-associated protein 11 homolog
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
108473645
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gab04131
]
108473645
Membrane trafficking [BR:
gab04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
108473645
Hops complex
108473645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS11_N
PEP5_VPS11_N
TPR_PEP5_VPS11
VPS11_C
Clathrin
TPR_Vps41
zf-C3H2C3
zf-C3HC4_2
TPR_11
zf_RING_Vps8_fungal
zf-RING_5
TPR_GEMI5
DBD_Tnp_Mut
TPR_ELP1
Motif
Other DBs
NCBI-GeneID:
108473645
NCBI-ProteinID:
XP_017630812
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All DBs
Position
11:18881993..18886883
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AA seq
953 aa
AA seq
DB search
MYQWRKFEFFEEKLGGGKCKIPEEISGKIECASSGRGKLVIGCDDGTVSLLDRGLNFNFG
FQAHSSSAFFLQMLKQRNFLVSIGEDEQISPQQSGMCLKVFDLDKMQPEGSSTTSPDCIG
ILRIFTNQFPQAKITSFLVLEEAPPILLIAIGLDNGCIYCIKGDIARERITRFKLQVDSS
SGEGNSSVTGLGFRLDGQALLLFAVTPNSVSLFSMQNQPPRRQLLDQIGCNVNSVAMSDR
SELIIGRPEAVYFYEVDGRGPCWAFEGEKKFLGWYRGYLLCVIADQRNGKNTFNIYDLKN
RLIAHSLVVKEVSHMLCEWGNIILIMTDKSALCIGEKDMESKLDMLFKKNLYTVAINLVQ
TQQADASATAEVLRKYGDHLYSKQDYDEAMAQYINTIGHLEPSYVIQKFLDAQRIYNLTN
YLENLHEKGLASKDHTTLLLNCYTKLKDVEKLNVFIKSEDGVGEHKFDVETAIRVCRAAN
YHEHAMYVAKKAGRHEWYLKILLEDLGRYDEALQYISSLEPSQAGVTVKEYGKILVEHKP
AETINILMRLCTEDIELAKRVTSNGGYLSMLPSPVDFLNIFIHHPQSLMDFLEKYADKVK
DSPAQVEIHNTLLELYLSIDLNFPSISQVNNGTDFNIKARTVSNGKLAVDGKNSSIEKDT
LERREKGLRLLKSAWPADLEHPLYDVDLAIILCEMNAFKEGLLYLYEKMKLFKEVIACYM
QVHDHEGLIACCKRLGDSGKGGDPTLWADLLKYFGELGEDCSKEVKEVLTYIERDDILPP
IIVLQTLSRNPCLTLSVIKDFIARKLEQESKLIEEDRRAIEKYQEDTMAMRKEIQDLRTN
ARIFQLSKCTACTFTLDLPAVHFMCMHSFHQRCLGDNEKECPECAPEYRSVMEMKRSLEQ
NSKDQDQFFQQVKSSKDGFSVIAEYFGKGVISKTSNGSTGTARSDSVSSSSGF
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atgtatcagtggaggaaattcgagttcttcgaggagaaattgggaggaggcaaatgcaaa
atcccggaggaaatcagtggaaaaatcgagtgtgcttccagcggaagaggaaagctcgtg
atcggctgcgatgacggcactgtaagcctcctggatcgcggccttaacttcaatttcggc
ttccaagctcattcttcctccgctttcttcctccaaatgctcaagcaacggaattttttg
gtgagtattggagaagatgaacaaatatcacctcagcaatcagggatgtgcttgaaggta
ttcgatcttgataaaatgcagccggaaggatcgagtaccactagtcctgattgtattgga
attttgcgtattttcaccaatcaattccctcaagctaagatcacatcatttctagtctta
gaggaagctccgccgatattacttatagctattgggttagacaatggttgcatttactgt
atcaagggagatattgcacgtgagagaataacccgattcaagctccaggtcgatagctca
tctggtgaagggaattcatcagttactggactaggttttagactggatggtcaagccctt
ctattatttgctgtaactccaaattctgtgagtttgttcagcatgcagaaccaacctcct
aggcggcaattattagatcagatcggatgcaatgtcaatagtgtcgcaatgagtgaccgc
tcggagttgataattggtcgacctgaggccgtgtatttttatgaagtagatgggcgtggt
ccctgttgggcttttgaaggagagaagaagttcttagggtggtatcgtggatatttatta
tgtgttattgctgatcaaagaaatggaaagaataccttcaatatttatgacctgaagaac
cggttaatagcacacagtctagttgttaaagaagtttctcacatgctttgtgaatggggc
aacataatacttataatgactgacaaatcagctttatgtattggtgagaaggatatggaa
agcaagttagatatgctctttaagaagaacctttacactgtagctatcaacctggttcaa
acacagcaagctgatgcttctgcaactgctgaagtacttaggaagtacggtgatcatctt
tatagcaagcaagactatgatgaggctatggcacagtacatcaacaccattggtcacctt
gaaccttcttatgtaatacaaaagtttctggatgcacaaagaatctacaaccttacaaat
tacttggaaaatttacatgagaaggggcttgcctctaaagatcacaccacccttctgtta
aactgctatactaaattgaaagatgttgaaaagttgaatgtgttcattaagagtgaggat
ggtgttggggaacataaattcgatgtggagactgctataagggtttgccgagcagcaaat
taccatgaacatgccatgtatgttgctaagaaggctggtcgccatgaatggtacttaaag
attttgcttgaagaccttggcagatatgatgaagctttgcaatatatctctagccttgaa
ccaagtcaagctggggtgacagtgaaggaatatgggaagattctcgtagaacacaaaccg
gcagagacaattaatatacttatgaggctgtgcactgaggatatagagttggctaaacgt
gtaacttcaaatggtggttacttatctatgttaccatctcctgttgatttcctcaacatt
ttcatccatcatccacaatctcttatggatttccttgaaaaatatgctgacaaggtaaaa
gattctcctgctcaagtagagattcataacacactcttggagttgtacctgtccattgat
ttgaacttcccatcaatctcccaagttaacaatggaacggattttaatattaaagcaaga
acagtgtccaacgggaagttagcagttgatggtaagaattcatccatagaaaaggacacg
ctggaaagacgtgaaaaggggctacgtttgcttaagagtgcatggccagctgatctggaa
catccactttatgatgttgatcttgctatcatcctatgcgagatgaatgcatttaaagaa
ggcttattgtatctctatgagaaaatgaaactttttaaagaagtgattgcttgctacatg
caagtccatgaccatgagggattgattgcatgttgcaaaaggctaggggattctggtaaa
ggaggggaccctactctatgggcagatcttctgaagtattttggtgaacttggggaagat
tgttctaaagaagtgaaagaagtattgacatatattgagagagatgacatcttgcctccc
attattgttcttcagacactttccaggaacccatgtctcacattatctgttattaaggat
ttcattgcccgaaaacttgaacaagagtcaaagctgattgaagaggacagacgagctata
gagaagtatcaggaagacacaatggcaatgagaaaagaaattcaggaccttaggacaaat
gccaggatatttcagctgagcaagtgcactgcttgcacttttacccttgacctacctgct
gtgcatttcatgtgtatgcactcatttcatcagcgttgccttggtgataatgaaaaggaa
tgccctgagtgtgctccagagtacagatctgtaatggaaatgaaaagaagcttggaacag
aattcaaaagatcaagatcaattcttccaacaagtcaagagctcaaaggatggattttcc
gtgattgctgaatattttggaaagggggtcattagtaaaacgagtaatggttccacagga
actgctagatcagacagcgtctcttccagcagtggcttctga
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