Gossypium arboreum (tree cotton): 108473689
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Entry
108473689 CDS
T05776
Name
(RefSeq) protein SUPPRESSOR OF PHYA-105 1 isoform X1
KO
K16240
protein suppressor of PHYA-105 1 and protein SPA1-related 2
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
108473689
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gab04121
]
108473689
Ubiquitin system [BR:
gab04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Multi subunit type E3 associated proteins
108473689
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WDR55
Beta-prop_RIG_2nd
Beta-prop_EIPR1
EIF3I
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_WDR19_1st
Beta-prop_TEP1_C
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_DCAF4
Pkinase
Beta-prop_HPS5
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR35_TULP_N
WD40_like
Motif
Other DBs
NCBI-GeneID:
108473689
NCBI-ProteinID:
XP_017630881
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Position
11:complement(9178447..9185584)
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AA seq
985 aa
AA seq
DB search
MERDGQEMAANELPETAEFKRKDLIFPLKSEGHILMESPMNGLSRFAPQYPGTSMNETET
ETGIIVEELTVENYKSSTLTLAKNSNNLRQGQWERMYHNQRLEHEVLDDENANHVLLRAK
EQLARMSYENHKSKDIDQTTGGMALHLKATDDHLGISSNSLSVAAARLKMSSRPSFSQLF
VKKGMKGKDIIRRDPHDQPCLLGIDRSTTDPCPNAISLREWLKPGSRQEDKVESLIIFRQ
IVELVDSAHLQGVVLQDIRPSCFCLLPPNRVIYTGLSVKQGLESAVSNDLKRKRDLEQGI
NASNCRRGTKKLKHNENMQPSGNKTEFASPHGSKTEMQKNIGFHTSIKQHSTSFLNQPPT
FHYATPSVVQSTSAATQMEERWYACPGELNGRSLTFSSNIYSLGVFLFELLCCFESMEQH
SAVMADLSQRNLPPNFLSESPKEAAFCLWLLHPGPLSRPTTREILRSDLFCGSQEKISGN
NLSESPGNDIVLSEILLHFLTKLEEQKQKRASKLMEEIRFLEEDIKEAKRRQALRTSSVF
PQIQNGFPDAGKKWMHSENPGTSVAHCVPNLKSDVNDGWLSKNIWQLEHAYFSMRSQIHS
SETAAAAVSDKDLLKKRGKLPESQSGNGKLRMNQKSIDPLGSFFKGLCKFACYSKFEVCG
TIRNRDLLNSANVICTLSFDRNEDYIATAGVSKRIKIFEFDAFMNDSIDIHYPVVEMSNK
SKISCVCWNNYVKNYLASTDYDGVVQTWDAGTGQGLCQYNEHQKRAWSVDFSQADPTKFA
SGSDDCSVKLWSINKQKSSLGTLWSPANVCCVQFSGFSPHLLAFGSADYKVYCYDLRHSR
IPLCTLAAHEKAVSYVKFLDSNTLLSASTDNTLKSWDLKKTCSDGSTTNTCCLTFSGHKN
EKNFVGLTVLDGYIACGSETNEVYCYYRSLPMPITSYKFGSIDPISGHQTSDENGQFVSS
VCWRQKSNMLVAANSTGSIELLKLV
NT seq
2958 nt
NT seq
+upstream
nt +downstream
nt
atggaacgagatgggcaagaaatggcagcaaatgaattaccagagactgctgaattcaaa
agaaaggacttaatttttcctttgaaatccgaaggtcatattttgatggaatcgccaatg
aatggtttgagtcgctttgcacctcaatatcctgggacttctatgaatgagaccgagact
gagactggtataatagtcgaagaattgactgtggaaaactataagagctcaactttaact
ttagccaagaactcgaacaacttaaggcagggtcagtgggaacgaatgtatcataatcaa
aggctggaacacgaggttttagatgatgaaaacgcaaaccatgtcttgttgagagcaaaa
gagcaacttgcaagaatgtcttatgagaaccataagagcaaggatattgaccagacgaca
gggggaatggctttgcatttgaaggctactgatgaccacttgggtatctcgagcaattca
ttgtcagttgcagctgctcggttgaaaatgtcatctaggcctagcttttctcagttattt
gtcaagaaaggtatgaaaggaaaggacattatcagaagagatccacatgaccaaccttgt
ttacttgggattgataggtctactactgacccttgccccaatgcgattagtttgagggaa
tggctaaaaccagggagtcgacaagaggataaagttgaaagcctgattatattcaggcag
attgtggagctggtggattcagcacatttgcaaggagttgtcttgcaagacatacgacca
tcctgtttctgtttattaccacctaatagggtaatctatactggtctgtctgtcaagcaa
ggactagagtctgcagtaagtaatgatttgaagagaaaaagggacctggaacagggtatt
aatgcttccaattgcagacgaggtacaaagaagctaaagcacaatgagaacatgcaacct
tctggaaacaaaacagaattcgcctctcctcatggatccaagaccgagatgcaaaaaaat
attggctttcatacatctattaagcaacattctacctcatttctcaaccagcctccaact
ttccactatgctacaccatctgttgtgcagtctacttctgcagctacacaaatggaggag
aggtggtatgcttgccccggggagctcaatggaagaagccttacattttcgtcaaatata
tatagccttggggttttcctttttgagttgctatgttgttttgaatcaatggagcagcat
tctgcagtgatggcagacttgagccagcggaatcttccaccaaatttcctttcagaaagt
cccaaggaagctgccttttgtctttggcttcttcatcctggacctctttctcgtccaaca
actagggaaatcttgcgctctgatttattttgtggatcccaagaaaagattagcgggaat
aatttatcagaatctcctggtaatgatattgttttatcagagatattactacattttcta
actaaactagaagaacaaaagcagaagcgtgcctccaaattgatggaagagattaggttc
ttagaagaagatattaaggaagctaagagaaggcaagcattaaggacatcctcagttttc
cctcaaatacaaaatggatttcctgatgcaggaaaaaagtggatgcattctgaaaatcct
ggaacttcagttgctcattgtgtaccaaatttgaagtcagatgtaaatgatggatggttg
tcaaaaaatatctggcaactcgagcatgcctacttctccatgagatcccaaatccactct
tctgaaactgctgctgcagcagtctctgacaaagacttactgaagaaacgaggcaagttg
cctgagtcacaaagtgggaatggaaagctgagaatgaatcagaaatctattgatcccctt
gggagctttttcaaaggtttgtgcaagtttgcttgctatagcaagtttgaagtctgtgga
acaataagaaatagagaccttctaaactctgcaaatgtgatatgcactcttagttttgac
cgtaatgaggattatattgctactgctggcgtatcaaagagaatcaagattttcgagttc
gatgcattcatgaatgattctattgatatccactatcccgttgttgagatgtcaaacaag
tcaaagattagctgtgtgtgctggaacaactacgtaaagaattatttggcttcaactgat
tatgatggtgttgtccagacatgggatgcgggaactggtcaaggactctgtcaatacaat
gaacaccaaaagagggcatggtctgtcgacttttctcaagctgacccaacaaagtttgct
agtggaagtgatgactgctctgtgaagctttggagcattaacaagcagaaaagttcgctt
ggaaccttgtggagccctgcaaatgtctgttgtgttcagttctctggtttctctccgcat
ctgttggcatttggatcggctgattacaaagtctattgctacgatctccgtcattctaga
atccccttgtgcacactggctgcccacgaaaaggctgttagctatgtcaaattcttggat
tccaacacccttctctctgcatccactgacaacaccctgaagtcgtgggatctcaagaaa
acttgctcggatggatcgaccaccaatacttgctgcttaacctttagtggccataaaaat
gagaagaactttgtgggtttaactgtcttggatggatatatagcatgtgggtcagaaacg
aatgaggtctattgttattatagatctctgccaatgcccatcacttcttataagttcggg
tctattgatcctatttctgggcatcaaaccagtgatgaaaatggacagttcgtttcaagt
gtctgttggagacaaaagtcaaacatgcttgttgctgccaactcaactggaagtatagaa
ttactgaaactagtgtga
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