Gossypium arboreum (tree cotton): 108473709
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Entry
108473709 CDS
T05776
Name
(RefSeq) nuclear pore complex protein NUP93A-like
KO
K14309
nuclear pore complex protein Nup93
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108473709
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gab03019
]
108473709
Messenger RNA biogenesis [BR:
gab03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
108473709
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Nic96
TPR_14
TPR_12
TPR_2
TPR_1
TPR_7
KwaB
PrmA
TPR_8
Motif
Other DBs
NCBI-GeneID:
108473709
NCBI-ProteinID:
XP_017630916
UniProt:
A0ABR0N9F5
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Position
11:135582904..135592070
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AA seq
863 aa
AA seq
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MRAMASEQGMSSWTDLLHSSTKLLEQAAPSAQFPPLQRNLDQLEALSKKLKAKTLRTEAP
SQSIAATRLLAREGINAEQLTRDLKSFELKTTFEDVFPAEATSVEEYLQQVHEMAMVSAI
QEAQKDNLRSFNDYMMKVLEEDWQKEKRDFLQSLSRISTLPKTNMIDKSSGGIRSGQMVP
MASSSQVSSGTSAIGLLPLADKPVVEKKVSVYAEVVRNLNNARQQGLPFKPATAFKVAYE
SLGTEASGGKSVNMQKMWHLILKLMGEDSMMRQSVSRKMSLVIGARRHLEWGHEKYIMDI
IQSHPAQAALGGAVGNLHRVRAFLRIRLRDYGLLDFDAGDARRQPPIDTTWQQIYFCLRT
GYYDEARQVALSSRASHQFAPLLAEWINGGGMVPAHTAAAAAEECEKMFRMGDRVGRASY
DKKKLLLYAIISGSRRQIDRLLRDIPSLFSTIEDFLWFILSAVQDFPGGTSSNEGLVPYS
LDDLQAYLNKFEPSYYTKNGKDPLVYPYILLLSIQLLPAISYLSKEAGEEEYHIDAAHIA
IVLADNGVLSEVSGAGQKLGVMDAYAEASSIIRQYGSMYLRLGNLQMALEYYAQAAAAVG
GGHVSWTGRGSVDQQRQMNLMLKQLLTEILFRDGGVYLLLGSRGAGEEGELRRFLTDHKA
RQQFLLEAARQCQDSGLYDKSIEIQKRIGAFSMALDTINKCLSEAICALSRGRLDGESQT
AGLIHSGNEILETFKYYPEVSFQEREHVSEQQTILRQLETILSIHKLTRLGQYLDALREV
AKIPFLPFDPRAPDTSADVLQNLSPHVQACLPDLLKVAITCLDNVSDTDGSLRAMRSKIA
TFLANNMRQNWPRDLYEKVAKSL
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atgagagctatggcgagtgagcaaggcatgagtagttggaccgatcttctccactcatcc
accaagcttcttgagcaagctgctccttctgctcagtttcctcctcttcagagaaactta
gatcagttagaagcactatcaaagaagctcaaggcaaaaaccttaagaactgaggctcct
tctcaatccattgctgccacaaggctacttgcacgggagggaattaacgctgaacagctt
acacgcgatctgaagtcttttgaattgaagacaacatttgaggatgttttccctgctgaa
gcaacaagcgttgaggagtatctgcagcaggttcatgaaatggcaatggtttcagccatc
caagaagctcagaaggataacctcagaagttttaatgattatatgatgaaagtgttggag
gaagattggcaaaaggaaaaacgggacttcttacagagtttgagcagaatttcaacatta
cctaagacaaacatgattgataaaagcagtggtggtattcgttcaggtcaaatggttccc
atggcttctagttctcaggtttcatctggtacttctgccattgggcttctacctttagct
gacaagccagttgttgagaaaaaagtgtcggtatatgctgaagttgttagaaatctgaac
aatgcaagacaacaaggcttgccatttaaacctgccacagcttttaaagttgcttatgag
agtttgggtactgaagcatctggtggcaaatcagttaacatgcagaaaatgtggcatctt
attctgaaattaatgggcgaggattcgatgatgcggcaaagtgtttctagaaagatgtca
ttagtaattggtgctagacgtcacctagaatggggacatgagaaatacattatggatata
atacaaagccatcctgcacaagctgctcttggtggagctgttggaaatttgcatagagtt
cgtgcctttcttcggattcgtttgagggattatggacttctggattttgatgcaggtgat
gctcgaaggcagcctcccattgataccacttggcagcagatttatttttgcttgaggacc
ggttattatgatgaagcaagacaagttgccctatcatcccgtgcttctcaccaatttgca
ccactgcttgcagagtggattaatggtggaggcatggtgccagcacacactgcagctgct
gctgcagaagagtgcgaaaaaatgttcagaatgggtgatcgggttggtcgagcttcatat
gacaagaaaaaactgttgctctatgctatcatatcggggtctcgtaggcaaattgaccgt
cttctcagagatataccatcacttttcagtaccatagaggatttcctgtggttcatattg
tcagcagtacaggactttcctggtggaacctcatctaatgagggcttagtaccatacagt
cttgacgatttgcaagcttacctaaacaaatttgagccgtcatattacacaaaaaatgga
aaggatcctctagtatatccgtacatcttgcttttaagtatccagttgctaccagctatt
tcatacctgtctaaagaagcaggagaggaagaataccatattgatgctgctcacatagca
attgtgctagcagacaatggggtcctttctgaagtttctggagccggacaaaagctggga
gttatggatgcgtacgcagaagcttctagcattattaggcagtatggctctatgtatcta
cggcttggtaaccttcaaatggctctagaatattacgcacaagctgctgctgcagtaggt
ggtggacatgtatcgtggactgggagaggtagtgtggatcagcaaaggcagatgaacttg
atgctgaagcagcttctcactgagatattgtttcgagatggtggggtttatcttttactt
ggttcgagaggtgctggagaggaaggtgaactgagacgatttttgactgatcataaagca
agacaacagtttctgctagaagctgcccgccaatgccaagattctgggctgtacgacaag
tctatagagattcagaagagaattggagcattttcgatggcattggatacgataaataag
tgcctctctgaagcaatttgtgccttatcacgcggtagattggatggtgagagtcaaact
gctggcctcattcactccggcaacgagatcttggagactttcaaatattatcctgaagtc
agtttccaagagagggaacatgtttcagagcaacaaaccatattaagacagctcgagact
atattatcaatccataaattgacaagactaggccagtatcttgatgctctacgagaagtt
gccaagatcccattccttccattcgatccacgagcacctgatacatctgccgatgtgctc
caaaatttatctcctcatgtccaagcttgtttgcctgatttgctaaaggttgctataact
tgtttggataatgtatccgatacagatggatcacttcgagccatgagatcaaagattgca
accttccttgcaaataatatgcgtcagaattggcctcgtgatttatacgagaaggtcgcc
aaaagcttgtga
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