Gossypium arboreum (tree cotton): 108473813
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Entry
108473813 CDS
T05776
Name
(RefSeq) uncharacterized protein LOC108473813
KO
K11790
denticleless
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gab04121
]
108473813
Ubiquitin system [BR:
gab04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
108473813
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_EML
EIF3I
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_EIPR1
Beta-prop_DCAF4
Beta-prop_DCAF12
Beta-prop_WDR90_POC16_2nd
MIOS_WD40
Beta-prop_WDR11_1st
Beta-prop_SCAP
Beta-prop_SPT8
WD_LRWD1
Beta-prop_IFT140_1st
Beta-prop_Nup120_160
WD40_RFWD3
Beta-prop_IP5PC_F
NBCH_WD40
Beta-prop_BBS7
Motif
Other DBs
NCBI-GeneID:
108473813
NCBI-ProteinID:
XP_017631072
UniProt:
A0A0B0P7F3
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Position
11:6236697..6242343
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AA seq
511 aa
AA seq
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MRTDSSTFQYFFHGIRSRELSSFRVRKRAWIDELASDFTEIGAIENNVLETPPLAVSFCK
ASKNSHIFAVSDEAGYVNLFDSRRELSSAASYHENAEKARIDDWLAHQNAIFDVCWIKED
THILTASGDQTIKVWDAQDKKCAGVLMGHTGSVKCLSSHPTNSDLVLSGSRDGSFAIWDL
RCKSNSKSRCDEVCHPSTSMVKGAHLSPQARRGRHGKAAAASITSVIYLKDEISIATSGA
ADSVVKFWDTRNLKSNVTQACPHPESSTQKGISSLSQDLKGVFLTASCMDNRIYLYNVLQ
LDKGPIDTFSGCQIESFYVKAAISPDGDHVLSGSSDGDAYIWKVNKPLAEPIILKGHKGE
VTAVDWCLSEVGKIATSADDFTVRLWNIEPRYCSSTRLPSSVRRRVMAVPSAESSKLLVN
ETVEPMDQIKQPGTCSSYSSDEALQIYSSSPATASLLRTPEAQKKKFPSTSDSNETFEKT
PEAAMRSPTSVLNPPSSLKRKTIRDYFLAIQ
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgcgaaccgattcgtcaactttccaatattttttccacggtatcagatccagagaactc
agtagctttagagttagaaaacgagcatggattgacgaattagcttcggattttactgaa
atcggagcgattgaaaacaatgttttagaaacgcctcctttggccgtctccttttgtaag
gcaagtaaaaattcccatattttcgctgtatctgatgaggctggatatgtaaacctgttt
gattctcggcgggagctttcttctgctgcatcttaccatgaaaatgcagaaaaagcaaga
atcgatgattggctagcacatcaaaatgccatatttgatgtatgttggatcaaggaagat
acccacattttaacagcttcaggggatcaaactataaaagtatgggatgctcaggataag
aaatgcgctggagtcttgatggggcatacgggaagtgttaaatgtttgagttctcatcca
accaattctgatcttgttctctctgggtcgagagatgggtcctttgccatttgggatcta
agatgcaagagtaactcgaaaagtagatgtgatgaagtctgccatccatcaacctccatg
gttaaaggagctcatctttcacctcaagcaaggcgggggaggcatggcaaggctgctgct
gccagcattacatcagttatttatctcaaagatgagatttccattgccacatctggagca
gcagacagtgttgtgaagttctgggataccagaaatctgaaatctaatgttactcaggca
tgtccacatccagagtcttcaacacaaaagggtatatctagcttgtcccaggatttgaaa
ggagtatttctcacagcatcttgcatggataacaggatatatttgtataatgtacttcag
cttgataagggcccgattgacactttctctggatgccaaatagaatctttttatgtaaag
gctgcaatcagtccagatggagatcacgtattaagtggttcaagtgatggagatgcttac
atatggaaggtaaacaagcctctagcggagcctatcatcttgaaaggtcataaaggagaa
gttacggcagtagattggtgcctatctgaggttgggaagatagcaacctctgcagatgat
ttcacggttcgactatggaacattgaacccagatactgctcgagcacaagattgccatct
tccgtccgaagaagagtaatggcagttccaagcgcagaaagtagtaagctattggtgaat
gagactgtagaaccaatggatcaaataaagcaacctggtacttgtagttcatattcttca
gatgaagcactccaaatttactcatctagtcctgccactgcatctttacttagaactcct
gaagcacagaagaaaaagttcccatcaacttcagactcaaatgaaacctttgagaaaaca
cctgaagccgcaatgaggagtccgacttcggtgctgaatcctccttcctcgttgaaacgg
aaaaccatccgcgattactttctagccattcaatga
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