Gossypium arboreum (tree cotton): 108473986
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Entry
108473986 CDS
T05776
Name
(RefSeq) vacuolar protein sorting-associated protein 36-like isoform X1
KO
K12190
ESCRT-II complex subunit VPS36
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108473986
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gab04131
]
108473986
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gab04147
]
108473986
Membrane trafficking [BR:
gab04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
108473986
Exosome [BR:
gab04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
108473986
Exosomal proteins of colorectal cancer cells
108473986
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
EAP30
Vps36_ESCRT-II
PH_TFIIH
Rrn6_beta-prop
Motif
Other DBs
NCBI-GeneID:
108473986
NCBI-ProteinID:
XP_017631312
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Position
11:complement(135676302..135682377)
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AA seq
554 aa
AA seq
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MVKYSREPDNPAKWSYLSMLQNLEKKKSFLISRKKYPKLIAAGMSNFFSKAEVTSSGRPV
LLHNEVECHLLSAVDLEPEDHRHFSLLKSGLLILTTHRLIWLPSSSASTPTSASAIPLAA
ISHIFSSKKSLKSVFHSPRIRFQVLVSSDGRVFDPSSGSGSSSGSGSRSVVVTAVIRGKG
DCDGFLVKFWDSWRARAWETTKTSSSGSGSASGSGAATGIGGGLYSSDGSVRMVGVAGIL
RKEQEMWESTDKSLQDAFQDLNALMSKAKEMVMLAEKMRQKLLSGTSSQTSGTNDEDMGS
KEEMQDWLLSVGIISPVTKESAGALYHQQLSRQLADFVRIPLERAGGMINLIDAYCLFNR
ARGTELISPDDMLQACSLWEKFDVPVMLRKFDSGVMVIQNKSHSDEEVFARIKSLVTKPE
ALRTGISPTDAAMTLGIAPAMAKEHLLTAESKGLLCRDISPDGFRFYINLFPEIDPCNMY
FVKDYGICSTWIKAVSTTALRSEANEEEEAGILSPSSSFISHDNMTWHFVRGHVLGRRGM
RFRQIVADWFVQAC
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagtattcaagagaaccggacaaccctgctaaatggagttatttaagtatgtta
cagaatttggagaaaaaaaagtcatttttgatcagtagaaaaaagtatccaaaattaatc
gccgctgggatgtccaactttttctccaaggcggaggtgacaagcagcggccgccctgtc
ctcctccacaacgaagtcgaatgccaccttctctccgccgtcgaccttgaacctgaagac
caccgtcacttctccctcttaaaatcgggtctcctcatcctcaccacccatcgcctcatc
tggctaccttcttcttccgcctccacccctacttccgcctcagccatccctcttgctgcc
atttcccacatcttctcttccaaaaaatctctcaagtccgtcttccactcccctaggatc
cgcttccaagtcctcgtctcgtccgatggtcgggtcttcgatccaagttccgggtctggt
tccagttcaggttcgggctcgagatcagtcgtagtaacggcagtgattagagggaagggg
gattgtgatgggtttttggtgaagttttgggacagttggcgggcgagagcttgggagact
actaagacttcaagttccggctcaggttctgcttcgggttcaggggcagccacaggaatc
ggtggagggttgtactcgagtgatgggtcggtgaggatggttggggtggcgggtatttta
aggaaggagcaagaaatgtgggagagtactgataaaagtttgcaggatgcttttcaggac
ttaaatgctctcatgagtaaagctaaagagatggtgatgctagcagaaaaaatgagacaa
aagcttttgtccggaacgagttctcaaacaagtggaacaaatgatgaggatatgggttca
aaggaagagatgcaagattggttgttgagtgttggcataatatccccagtcactaaagag
tctgcaggtgccctgtaccatcaacaattgtcccgtcagctagcagattttgtgagaatt
ccactggagagagcaggtggaatgattaaccttatagatgcctattgtctcttcaatcgt
gctcgtggcacagaattgatctctccagatgatatgttgcaagcgtgttctttgtgggag
aaatttgatgttccagtgatgcttagaaagtttgatagcggagttatggtgatccaaaac
aagtcccatagtgatgaggaggtttttgctagaatcaaaagccttgtgactaagcctgaa
gcgcttcgaactggtataagcccaactgatgctgcaatgacattagggattgctccggct
atggccaaggagcatcttctaactgcagagagcaaaggtttgctatgcagagatataagc
cccgatggctttcggttttatattaacctgtttcctgaaatcgacccatgtaatatgtat
tttgtgaaggattatgggatctgcagtacttggatcaaggcagtttctactaccgcatta
agatctgaagctaatgaagaagaggaagcggggattttatcaccatcatcatcattcatt
agtcatgataacatgacgtggcattttgtaagggggcacgtgcttgggagaagggggatg
agattcagacaaatagtggctgactggttcgtacaggcttgctga
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